Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 RNU6-743P-201ENST00000364151 106 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 SNORA29-201ENST00000384183 140 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 MIR301A-201ENST00000385261 86 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 RNU6-278P-201ENST00000390945 109 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC119751.3-201ENST00000399720 670 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 FCF1P10-201ENST00000407590 479 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.39□□□□□ -2.19
CHMP4BQ9H444 HMGN2P18-201ENST00000450680 270 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC012308.1-201ENST00000451232 178 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.39□□□□□ -2.19
CHMP4BQ9H444 MTND3P13-201ENST00000574391 343 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC092574.1-201ENST00000609771 420 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC092140.2-201ENST00000618027 521 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC012676.2-201ENST00000619258 186 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 AC092656.1-203ENST00000624134 423 ntBASIC1.39□□□□□ -2.19
CHMP4BQ9H444 SNORD14B-201ENST00000364533 90 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 UBE2V1P10-201ENST00000414685 269 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 OR6C66P-201ENST00000414917 930 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 NCOR1P3-201ENST00000420479 303 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC139712.2-201ENST00000424302 339 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 SNORD97-201ENST00000459187 142 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 MTND1P16-201ENST00000465177 898 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 MIR4295-201ENST00000585286 85 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP4BQ9H444 MIR3529-201ENST00000637713 78 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 AC099654.8-201ENST00000637757 681 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 MTND5P9-201ENST00000503854 1755 ntBASIC1.38□□□□□ -2.19
CHMP4BQ9H444 RNU6-655P-201ENST00000362858 107 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 Y_RNA.140-201ENST00000363474 103 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 RNU6-1025P-201ENST00000410629 104 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 USP9YP33-201ENST00000412220 421 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 USP9YP11-201ENST00000427537 717 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 TOMM22P2-201ENST00000430735 237 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 RNU6-953P-201ENST00000459154 107 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 OR2A41P-201ENST00000473586 105 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 AC108729.1-201ENST00000487812 947 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 RNU6-1315P-201ENST00000517187 99 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 MTCYBP33-201ENST00000575007 1130 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 BNIP3P26-201ENST00000600827 554 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 AC093648.1-201ENST00000623546 606 ntBASIC1.37□□□□□ -2.19
CHMP4BQ9H444 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CHMP4BQ9H444 RNU6-529P-201ENST00000363383 104 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 RNU6-621P-201ENST00000364752 109 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 Y_RNA.311-201ENST00000365068 96 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 SNORA4.3-201ENST00000365564 137 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 RNU6-843P-201ENST00000384454 104 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 Y_RNA.534-201ENST00000384599 112 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 RPS26P55-201ENST00000471178 356 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 MTND1P3-201ENST00000484956 952 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC093852.1-201ENST00000503587 266 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 SNORA31.17-201ENST00000516953 127 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC002400.1-201ENST00000569310 726 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC124016.2-201ENST00000610058 665 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AC245297.2-201ENST00000610119 565 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 AL391516.1-201ENST00000554380 2449 ntBASIC1.36□□□□□ -2.19
CHMP4BQ9H444 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 RNU5A-8P-201ENST00000364102 114 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 RNU6-1187P-201ENST00000364771 110 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 SNRPEP10-201ENST00000420249 274 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC092648.1-201ENST00000425870 423 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AL606517.1-201ENST00000446914 387 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 RPL39P29-201ENST00000447779 157 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC087343.1-201ENST00000477341 475 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC010409.1-201ENST00000487382 476 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 RN7SKP256-201ENST00000517201 314 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AL157871.3-201ENST00000557231 293 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC112220.2-201ENST00000605513 533 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC024060.1-201ENST00000607052 494 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 AC018926.1-201ENST00000616335 435 ntBASIC1.35□□□□□ -2.19
CHMP4BQ9H444 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.35□□□□□ -2.19
CHMP4BQ9H444 Y_RNA.40-201ENST00000362645 93 ntBASIC1.34□□□□□ -2.19
CHMP4BQ9H444 Y_RNA.99-201ENST00000363138 105 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms