Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL356094.1-201ENST00000624663 1212 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC099654.9-201ENST00000637055 678 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 AL079343.1-201ENST00000572358 1771 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC092447.10-201ENST00000620607 1652 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC092648.1-201ENST00000425870 423 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC109927.2-201ENST00000506416 303 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 RNU6-1225P-201ENST00000516336 65 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AP003034.1-201ENST00000534621 422 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 MIR4422-201ENST00000581938 83 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC098483.2-201ENST00000603158 454 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC004908.3-201ENST00000610248 625 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 AC090517.3-201ENST00000625170 141 ntBASIC1.13□□□□□ -2.23
TRIM4Q9C037 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.13□□□□□ -2.23
TRIM4Q9C037 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM4Q9C037 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM4Q9C037 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM4Q9C037 SNORD114-19-201ENST00000363072 75 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 Y_RNA.115-201ENST00000363272 98 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM4Q9C037 RNU1-78P-201ENST00000391248 165 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC104563.1-201ENST00000476147 376 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC104629.1-201ENST00000494226 508 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 SNORA31.3-201ENST00000516029 96 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.12□□□□□ -2.23
TRIM4Q9C037 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.12□□□□□ -2.23
TRIM4Q9C037 AL133153.1-201ENST00000557756 303 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC098614.4-201ENST00000607601 462 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC231657.1-201ENST00000624313 397 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM4Q9C037 AC097655.1-201ENST00000635075 318 ntBASIC1.12□□□□□ -2.23
TRIM4Q9C037 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM4Q9C037 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU1-133P-201ENST00000364867 167 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU6-744P-201ENST00000365557 107 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 Y_RNA.408-201ENST00000383987 102 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU6-546P-201ENST00000383991 107 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU6-468P-201ENST00000384003 109 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU6-1316P-201ENST00000384242 108 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU6-1274P-201ENST00000384557 107 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 SNORA48.1-201ENST00000390879 135 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 AL359634.1-202ENST00000404721 284 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RPL39P29-201ENST00000447779 157 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNU2-53P-201ENST00000516257 147 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 RNVU1-2-201ENST00000516326 135 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 MIR1273G-201ENST00000577677 100 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM4Q9C037 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
TRIM4Q9C037 AC073410.2-201ENST00000603240 332 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 Z82243.1-201ENST00000609432 473 ntBASIC1.11□□□□□ -2.23
TRIM4Q9C037 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
TRIM4Q9C037 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM4Q9C037 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM4Q9C037 SNORD14B-201ENST00000364533 90 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 HMGN1P14-201ENST00000412459 517 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.1□□□□□ -2.23
TRIM4Q9C037 ELOCP30-201ENST00000447108 299 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 BTF3P15-201ENST00000455606 336 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC009902.1-201ENST00000519351 183 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC104072.1-201ENST00000568817 668 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AP001542.1-201ENST00000591314 200 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC069545.1-201ENST00000605671 358 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.1□□□□□ -2.23
TRIM4Q9C037 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
TRIM4Q9C037 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 Y_RNA.458-201ENST00000384240 102 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 FTH1P15-201ENST00000406984 280 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.09□□□□□ -2.23
TRIM4Q9C037 RSL24D1P8-201ENST00000434442 492 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC112492.4-201ENST00000456549 352 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 snoU13.9-201ENST00000458927 103 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.09□□□□□ -2.23
TRIM4Q9C037 RNU6-150P-201ENST00000516237 95 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 RNU6-405P-201ENST00000516637 110 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 RNU6-572P-201ENST00000516724 80 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 RNU6-467P-201ENST00000517027 110 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC060771.1-201ENST00000582031 164 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 591 ms