Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PAXBP1P1-201ENST00000449315 447 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 SNRPFP3-201ENST00000457792 225 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 MEMO1P3-201ENST00000459811 302 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RN7SKP256-201ENST00000517201 314 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 MIR4293-201ENST00000584305 78 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 BNIP3P9-201ENST00000603714 553 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 ZNF29P-201ENST00000225587 168 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 RNU6-546P-201ENST00000383991 107 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 MIR222-201ENST00000384992 110 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 RNU2-41P-201ENST00000410991 178 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 POLR2J4-204ENST00000418424 324 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC007395.1-201ENST00000451333 677 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC104629.1-201ENST00000494226 508 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC093852.1-201ENST00000503587 266 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 RNY4P37-201ENST00000516225 96 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 RNU2-53P-201ENST00000516257 147 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 RNU6-572P-201ENST00000516724 80 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AP003355.1-201ENST00000518956 587 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC022616.8-201ENST00000533569 253 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC080078.3-201ENST00000605407 463 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC099785.1-201ENST00000605697 437 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AL022345.1-201ENST00000607292 135 ntBASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UPF3BQ9BZI7 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RNU6-621P-201ENST00000364752 109 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 MIR301A-201ENST00000385261 86 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 SNORA40C-201ENST00000391285 128 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RNU2-36P-201ENST00000410361 191 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RNU2-32P-201ENST00000411193 191 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 MTND4P3-201ENST00000417829 541 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC005534.2-201ENST00000431047 433 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AL078601.1-201ENST00000444542 271 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RPL31P58-201ENST00000469001 379 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC034244.1-201ENST00000507687 207 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AP006587.4-201ENST00000526053 529 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC087894.1-201ENST00000538359 518 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC109446.2-201ENST00000567872 497 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 AC095038.3-201ENST00000634439 195 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 MIR3529-201ENST00000637713 78 ntBASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UPF3BQ9BZI7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 MIR186-201ENST00000384988 86 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AL591704.1-201ENST00000432574 275 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 MTND1P18-201ENST00000448191 573 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 RNU6-64P-201ENST00000517119 105 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AP003049.1-201ENST00000529418 457 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 TRAV32-201ENST00000553993 340 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC093249.1-201ENST00000567049 203 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC136618.2-201ENST00000575091 400 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 RN7SL793P-201ENST00000583259 296 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 CLIC4P2-201ENST00000601934 717 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 uc_338.15-201ENST00000615470 191 ntBASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
UPF3BQ9BZI7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RNU6-853P-201ENST00000364306 107 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RNU6-843P-201ENST00000384454 104 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 FTH1P15-201ENST00000406984 280 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RNA5SP100-201ENST00000410903 110 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RNA5SP59-201ENST00000410922 110 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 MTCO1P17-201ENST00000411522 491 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms