Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC092608.2-201ENST00000624427 218 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.176-201ENST00000363815 109 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-371P-201ENST00000364283 108 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.364-201ENST00000365532 101 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 DEFB109C-201ENST00000382575 264 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 DEFB109B-201ENST00000382656 264 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.404-201ENST00000383978 102 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-190P-201ENST00000384154 102 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-95P-201ENST00000384697 107 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU2-43P-201ENST00000410306 190 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.594-201ENST00000410373 140 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-293P-201ENST00000411259 106 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 HMGB3P2-201ENST00000411913 584 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AL139132.1-201ENST00000431587 344 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.670-201ENST00000516255 105 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-390P-201ENST00000516259 103 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNU6-323P-201ENST00000521915 107 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 GNAI2P1-201ENST00000541815 315 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 AC005899.2-201ENST00000584353 90 ntBASIC3.6□□□□□ -1.83
SALL3Q9BXA9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SALL3Q9BXA9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC096644.4-201ENST00000563417 2912 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.47-201ENST00000362697 108 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 RNU1-35P-201ENST00000362782 153 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 SNORA71.1-201ENST00000364523 117 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 MIR128-1-201ENST00000384921 82 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AL603908.1-201ENST00000406098 201 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC080125.1-201ENST00000414888 684 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AL160275.3-201ENST00000423876 471 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC008267.5-201ENST00000424928 265 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 UBE2V1P4-201ENST00000425374 344 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC093151.1-201ENST00000427711 313 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC104472.2-201ENST00000469035 601 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AL049830.2-201ENST00000480072 201 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 MRPS35P2-201ENST00000508242 191 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC096745.1-201ENST00000509945 370 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 RNU6-307P-201ENST00000516743 106 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC126177.3-201ENST00000551839 688 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.59□□□□□ -1.83
SALL3Q9BXA9 SNORD84-203ENST00000584275 78 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 AC007485.1-201ENST00000616755 206 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.59□□□□□ -1.83
SALL3Q9BXA9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SALL3Q9BXA9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
SALL3Q9BXA9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.84
SALL3Q9BXA9 AC108206.1-201ENST00000570186 4159 ntBASIC3.59□□□□□ -1.84
SALL3Q9BXA9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNA5SP295-201ENST00000362655 121 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNU6-45P-201ENST00000384471 107 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 SNORA41-201ENST00000384675 132 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.557-201ENST00000384680 107 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNU6-712P-201ENST00000410558 100 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNU4-61P-201ENST00000411243 107 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 MTATP6P29-201ENST00000415057 132 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 USMG5P1-201ENST00000425964 177 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNU6-475P-201ENST00000516073 104 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 RNA5SP468-201ENST00000516782 93 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.721-201ENST00000517207 102 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AP002404.1-201ENST00000532005 451 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AL161670.1-201ENST00000554348 137 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 MIR4325-201ENST00000583049 90 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 BNIP3P16-201ENST00000589779 534 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC007619.2-201ENST00000605743 379 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC005014.2-201ENST00000607795 599 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms