Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 PSMA3P-201ENST00000555485 635 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 TPRKBP2-201ENST00000565969 475 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC090897.2-201ENST00000581715 130 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RPL23AP88-201ENST00000605759 454 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC024581.2-201ENST00000619986 252 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC007792.1-201ENST00000623023 402 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 FER-210ENST00000628534 558 ntTSL 5 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC068137.3-201ENST00000639191 341 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 OR4G1P-203ENST00000641984 1631 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RNU4-12P-201ENST00000365233 139 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RNU4-20P-201ENST00000365601 151 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RNU1-109P-201ENST00000383960 147 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 MIR128-1-201ENST00000384921 82 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RPS3AP44-201ENST00000425466 790 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RNU7-26P-201ENST00000458980 63 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.654-201ENST00000497848 106 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RPL38P4-201ENST00000502376 214 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 RNA5SP341-201ENST00000516261 117 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 MTND1P5-201ENST00000517906 940 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 uc_338.15-201ENST00000615470 191 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.07□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.6-201ENST00000362350 114 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 SNORA38-201ENST00000363946 132 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 RNU1-140P-201ENST00000365040 165 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.554-201ENST00000384672 102 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 MIR181A2-201ENST00000384863 110 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 SNORA48.2-201ENST00000390926 124 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-192P-201ENST00000391253 100 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AL451074.5-201ENST00000415894 435 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 EIF4EP4-201ENST00000424916 578 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AC090096.1-201ENST00000489168 390 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 CKS1BP7-201ENST00000522230 235 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 MTND1P35-201ENST00000526739 508 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AC107304.1-201ENST00000604229 296 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AC103705.1-201ENST00000619013 241 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 MIR5739-201ENST00000619803 80 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 AC097372.5-201ENST00000623665 376 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.06□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-105P-201ENST00000363909 104 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-1090P-201ENST00000364065 94 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AL590004.2-201ENST00000404787 371 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-908P-201ENST00000410160 94 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.604-201ENST00000410574 102 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 RNU7-138P-201ENST00000459479 64 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 S100A11P2-201ENST00000467589 312 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 RPL30P12-201ENST00000474666 353 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AL118558.2-201ENST00000556294 238 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC010525.2-201ENST00000590920 195 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AC092807.2-201ENST00000609367 243 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 AL020991.1-201ENST00000612314 373 ntBASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
HERPUD2Q9BSE4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC002543.1-201ENST00000299783 1954 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.38-201ENST00000362617 102 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-212P-201ENST00000362642 104 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 RNY4P14-201ENST00000363656 96 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.04□□□□□ -1.92
HERPUD2Q9BSE4 MIR186-201ENST00000384988 86 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms