Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 Y_RNA.216-201ENST00000364205 93 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 SNORA33.2-201ENST00000365413 134 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 SNORA22B-201ENST00000383876 138 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 BTF3L4P2-201ENST00000392798 346 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AC002075.2-201ENST00000425207 252 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.31□□□□□ -1.88
VRK1Q99986 RPS3AP46-201ENST00000448352 682 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AL133547.1-201ENST00000448546 220 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AL031183.1-201ENST00000457667 207 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 FO393415.2-201ENST00000480085 343 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.31□□□□□ -1.88
VRK1Q99986 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 RNU6-699P-201ENST00000517081 110 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.31□□□□□ -1.88
VRK1Q99986 AC023442.1-201ENST00000531247 422 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.31□□□□□ -1.88
VRK1Q99986 AC019159.1-201ENST00000605094 187 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AC005014.2-201ENST00000607795 599 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AC009318.2-201ENST00000610917 651 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK1Q99986 ZNF299P-201ENST00000406845 1804 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VRK1Q99986 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VRK1Q99986 SNORD56.1-201ENST00000362913 68 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 MIR184-201ENST00000384962 84 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 RNU6-750P-201ENST00000390946 107 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
VRK1Q99986 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.3□□□□□ -1.88
VRK1Q99986 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 PTGES3P4-201ENST00000426243 356 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 AC099799.1-201ENST00000439809 192 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VRK1Q99986 AC079354.2-201ENST00000453523 154 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.3□□□□□ -1.88
VRK1Q99986 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.3□□□□□ -1.88
VRK1Q99986 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 RNU5F-8P-201ENST00000515941 111 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 RNU6-711P-201ENST00000517255 106 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.3□□□□□ -1.88
VRK1Q99986 CKS1BP7-201ENST00000522230 235 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.3□□□□□ -1.88
VRK1Q99986 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VRK1Q99986 AL121772.2-201ENST00000614331 297 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 AC097372.5-201ENST00000623665 376 ntBASIC3.3□□□□□ -1.88
VRK1Q99986 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
VRK1Q99986 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VRK1Q99986 AC008669.1-201ENST00000565823 2178 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VRK1Q99986 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
VRK1Q99986 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
VRK1Q99986 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
VRK1Q99986 RNY1P16-201ENST00000363063 111 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RNU6-595P-201ENST00000363944 107 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RNU1-115P-201ENST00000365329 160 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC117470.1-201ENST00000381974 330 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 Y_RNA.428-201ENST00000384078 102 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 Y_RNA.533-201ENST00000384596 114 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RNU6-748P-201ENST00000384648 107 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RNU6-19P-201ENST00000384718 107 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC008267.5-201ENST00000424928 265 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RPS29P31-201ENST00000446147 164 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK1Q99986 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK1Q99986 AP001025.1-201ENST00000486139 332 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.29□□□□□ -1.88
VRK1Q99986 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK1Q99986 RNU6-120P-201ENST00000516077 103 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 RN7SKP295-201ENST00000517264 153 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK1Q99986 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.29□□□□□ -1.88
VRK1Q99986 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC006504.6-201ENST00000590142 199 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC016925.2-201ENST00000605108 242 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
VRK1Q99986 AC010889.1-201ENST00000566193 2666 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VRK1Q99986 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VRK1Q99986 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VRK1Q99986 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
VRK1Q99986 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
VRK1Q99986 AC007496.3-201ENST00000624987 3443 ntBASIC3.28□□□□□ -1.88
VRK1Q99986 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK1Q99986 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VRK1Q99986 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
VRK1Q99986 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VRK1Q99986 Y_RNA.48-201ENST00000362710 103 ntBASIC3.28□□□□□ -1.88
VRK1Q99986 RNU6-622P-201ENST00000384272 103 ntBASIC3.28□□□□□ -1.88
VRK1Q99986 Y_RNA.577-201ENST00000384794 101 ntBASIC3.28□□□□□ -1.88
VRK1Q99986 RNU6-308P-201ENST00000390957 107 ntBASIC3.28□□□□□ -1.88
VRK1Q99986 RNA5SP171-201ENST00000391071 115 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms