Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC139712.2-201ENST00000424302 339 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA3Q99758 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA3Q99758 snoU13.19-201ENST00000459148 104 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC104692.1-201ENST00000472406 90 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AL163195.1-201ENST00000496941 348 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 RNU5B-3P-201ENST00000516601 115 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AL021879.1-201ENST00000611756 288 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 EIF1P1-201ENST00000421436 341 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AL049874.1-201ENST00000489560 388 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AL160314.1-201ENST00000490836 438 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 RNU6-758P-201ENST00000516292 89 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AL590705.4-201ENST00000532209 134 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC112220.3-201ENST00000605502 502 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.44□□□□□ -2.34
ABCA3Q99758 AF129408.1-201ENST00000608767 431 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 AC011939.3-201ENST00000613686 466 ntBASIC0.44□□□□□ -2.34
ABCA3Q99758 Y_RNA.476-201ENST00000384347 108 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 MIR329-1-201ENST00000385028 80 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.43□□□□□ -2.34
ABCA3Q99758 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.43□□□□□ -2.34
ABCA3Q99758 AC005741.1-201ENST00000511094 432 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 PTP4A1P4-201ENST00000512479 322 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
ABCA3Q99758 SNORD14D-201ENST00000384390 87 ntBASIC0.42□□□□□ -2.34
ABCA3Q99758 RNU6-77P-201ENST00000410554 91 ntBASIC0.42□□□□□ -2.34
ABCA3Q99758 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.42□□□□□ -2.34
ABCA3Q99758 SNRPEP9-201ENST00000436794 238 ntBASIC0.42□□□□□ -2.34
ABCA3Q99758 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.42□□□□□ -2.34
ABCA3Q99758 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.42□□□□□ -2.34
ABCA3Q99758 CYP3A52P-201ENST00000563326 91 ntBASIC0.42□□□□□ -2.34
ABCA3Q99758 MIR8063-201ENST00000621930 81 ntBASIC0.42□□□□□ -2.34
ABCA3Q99758 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
ABCA3Q99758 RNA5SP368-201ENST00000364298 116 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 MIR421-201ENST00000365696 85 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 MIR10B-201ENST00000385011 110 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 RPL31P54-201ENST00000429803 370 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 GTF2IP13-201ENST00000438487 386 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA3Q99758 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
ABCA3Q99758 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
ABCA3Q99758 RNU4-57P-201ENST00000515980 135 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 NRON-201ENST00000517270 370 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA3Q99758 AC004492.1-201ENST00000607036 742 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AC024060.1-201ENST00000607052 494 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AL590396.2-201ENST00000636511 1041 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AL138713.1-201ENST00000624026 2130 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
ABCA3Q99758 SNORA4.3-201ENST00000365564 137 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 MIR19B1-201ENST00000384829 87 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AC007919.1-201ENST00000429380 217 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA3Q99758 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
ABCA3Q99758 MIR5190-201ENST00000581537 80 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 AC091152.3-201ENST00000604227 325 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 BX284668.6-201ENST00000606899 438 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 RNU6-91P-201ENST00000607774 107 ntBASIC0.41□□□□□ -2.34
ABCA3Q99758 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.41□□□□□ -2.34
ABCA3Q99758 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.41□□□□□ -2.34
ABCA3Q99758 RNY4P3-201ENST00000365254 95 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 MTCYBP38-201ENST00000417160 1123 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.4□□□□□ -2.35
ABCA3Q99758 FAM204CP-201ENST00000424489 642 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
ABCA3Q99758 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.4□□□□□ -2.35
ABCA3Q99758 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.4□□□□□ -2.35
ABCA3Q99758 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.4□□□□□ -2.35
ABCA3Q99758 AC109329.1-201ENST00000518744 317 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
ABCA3Q99758 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.4□□□□□ -2.35
ABCA3Q99758 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.4□□□□□ -2.35
ABCA3Q99758 AC239868.4-201ENST00000608318 671 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 AC107075.1-201ENST00000613695 314 ntBASIC0.4□□□□□ -2.35
ABCA3Q99758 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA3Q99758 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA3Q99758 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA3Q99758 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA3Q99758 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.39□□□□□ -2.35
ABCA3Q99758 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.39□□□□□ -2.35
ABCA3Q99758 AC069304.2-201ENST00000605154 435 ntBASIC0.39□□□□□ -2.35
ABCA3Q99758 uc_338.17-201ENST00000619633 179 ntBASIC0.39□□□□□ -2.35
ABCA3Q99758 AC119674.1-220ENST00000641502 1048 ntBASIC0.39□□□□□ -2.35
ABCA3Q99758 SNORA4.1-201ENST00000364263 144 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AL161935.2-201ENST00000414627 60 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 CCDC58P2-201ENST00000417131 366 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 RPL23AP95-201ENST00000426806 265 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.38□□□□□ -2.35
ABCA3Q99758 RPS15AP9-201ENST00000439856 381 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 AP001324.2-201ENST00000461163 319 ntBASIC0.38□□□□□ -2.35
ABCA3Q99758 MTND1P16-201ENST00000465177 898 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms