Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNY3P15-201ENST00000516297 97 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 SNORA40.14-201ENST00000516543 86 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AC004584.2-201ENST00000570407 410 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR3921-201ENST00000577308 85 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AC005357.1-201ENST00000588399 301 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.24□□□□□ -1.89
TIMP4Q99727 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC125232.2-201ENST00000592457 143 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR7851-201ENST00000610611 160 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AL138825.1-201ENST00000618587 192 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR8062-201ENST00000621515 85 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC068647.1-201ENST00000489539 2265 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
TIMP4Q99727 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TIMP4Q99727 RNU6-874P-201ENST00000362390 105 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 SNORD14B-201ENST00000364533 90 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TIMP4Q99727 SNORA51.11-201ENST00000384442 131 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 RPL21P1-201ENST00000399532 476 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.23□□□□□ -1.89
TIMP4Q99727 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 MYL8P-204ENST00000431574 518 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
TIMP4Q99727 RPS24P6-201ENST00000452670 400 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.23□□□□□ -1.89
TIMP4Q99727 AK3P2-201ENST00000507976 429 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 RNU6-397P-201ENST00000516226 104 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC144568.1-201ENST00000520139 137 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AP000889.1-201ENST00000530968 660 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 MIR3690-201ENST00000580266 75 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC008121.1-201ENST00000603244 268 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC004852.3-201ENST00000614131 326 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AC090132.2-201ENST00000615881 347 ntBASIC3.23□□□□□ -1.89
TIMP4Q99727 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.23□□□□□ -1.89
TIMP4Q99727 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.23□□□□□ -1.89
TIMP4Q99727 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TIMP4Q99727 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TIMP4Q99727 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TIMP4Q99727 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.23□□□□□ -1.89
TIMP4Q99727 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
TIMP4Q99727 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TIMP4Q99727 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TIMP4Q99727 Y_RNA.461-201ENST00000384263 103 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 MIR34B-201ENST00000385076 84 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TIMP4Q99727 AL591034.2-201ENST00000402839 359 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 RNU6-847P-201ENST00000411115 108 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
TIMP4Q99727 ELOCP20-201ENST00000422460 345 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 MTND3P9-201ENST00000429526 346 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AL159987.2-201ENST00000432754 307 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.22□□□□□ -1.89
TIMP4Q99727 snoU109.2-201ENST00000459316 135 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 U8.21-201ENST00000459536 136 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.22□□□□□ -1.89
TIMP4Q99727 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.22□□□□□ -1.89
TIMP4Q99727 AC107222.1-201ENST00000510899 637 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 SNORA31.8-201ENST00000516327 108 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 RNA5SP165-201ENST00000517142 115 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AP005902.1-201ENST00000521358 186 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 IGHV3-76-201ENST00000522465 295 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 SRGNP1-201ENST00000603392 451 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AL161629.2-201ENST00000615347 275 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AC022149.2-201ENST00000621061 203 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 AC032011.1-201ENST00000611703 1549 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TIMP4Q99727 MTND5P7-201ENST00000413558 1798 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 MTND5P9-201ENST00000503854 1755 ntBASIC3.22□□□□□ -1.89
TIMP4Q99727 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TIMP4Q99727 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
TIMP4Q99727 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TIMP4Q99727 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TIMP4Q99727 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TIMP4Q99727 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TIMP4Q99727 Y_RNA.26-201ENST00000362539 101 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 Y_RNA.64-201ENST00000362845 102 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-428P-201ENST00000362942 107 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNA5SP50-201ENST00000363731 107 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 Y_RNA.214-201ENST00000364201 112 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 Y_RNA.288-201ENST00000364854 92 ntBASIC3.21□□□□□ -1.9
TIMP4Q99727 RNU6-806P-201ENST00000365147 105 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms