Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU1-18P-201ENST00000363062 164 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.458-201ENST00000384240 102 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.592-201ENST00000410274 109 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU4-78P-201ENST00000410940 126 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 DAP3P1-201ENST00000441522 278 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-346P-201ENST00000516288 111 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.683-201ENST00000516508 93 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 RN7SKP83-201ENST00000516512 178 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.713-201ENST00000517013 96 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 AC144568.1-201ENST00000520139 137 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 SNRPGP16-201ENST00000533275 226 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 HMGB1P14-201ENST00000557424 591 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR3944-201ENST00000581277 108 ntBASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.73□□□□□ -1.81
CDK5RAP1Q96SZ6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC093908.1-201ENST00000623125 8092 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AL359854.1-201ENST00000614203 1594 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 SNORA71.3-201ENST00000362582 128 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.526-201ENST00000384572 110 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 MT-TC-201ENST00000387405 66 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 SNORA69.1-201ENST00000390904 137 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 SNORD58.1-201ENST00000391313 66 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AL513475.1-201ENST00000406602 315 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 U3.39-201ENST00000408569 239 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-1140P-201ENST00000410517 106 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNA5SP494-201ENST00000410653 129 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.793-201ENST00000411222 111 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC004866.2-201ENST00000438285 481 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC008264.1-201ENST00000447612 367 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AL136097.1-201ENST00000456945 913 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.644-201ENST00000459006 113 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RPL21P104-201ENST00000464143 478 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RPS4XP13-201ENST00000483219 789 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU1-86P-201ENST00000516108 154 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU2-27P-201ENST00000516185 142 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.674-201ENST00000516362 113 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU1-107P-201ENST00000516617 154 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-914P-201ENST00000516749 109 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC022559.1-201ENST00000520905 205 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 SNRPGP15-201ENST00000600149 222 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC084757.4-201ENST00000616350 526 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 U73479.1-201ENST00000618062 168 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC021753.1-201ENST00000635724 168 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 AC005183.1-201ENST00000603687 1979 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 PRO1804-201ENST00000623780 2050 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDK5RAP1Q96SZ6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.81
CDK5RAP1Q96SZ6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
CDK5RAP1Q96SZ6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 U8.8-201ENST00000365399 135 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.464-201ENST00000384282 110 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 Y_RNA.541-201ENST00000384640 113 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AL451062.2-201ENST00000427515 271 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 MTCO3P29-201ENST00000432119 779 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 RBMY2UP-201ENST00000453474 324 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 RN7SL594P-201ENST00000470590 287 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 SUMO2P6-201ENST00000505273 288 ntBASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.71□□□□□ -1.82
CDK5RAP1Q96SZ6 RNU4-71P-201ENST00000516258 113 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 342 ms