Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 VN1R83P-201ENST00000595685 445 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC093648.1-201ENST00000623546 606 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 ICE2P2-201ENST00000483823 2787 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 OR4G1P-203ENST00000641984 1631 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 SNORD33-201ENST00000362761 85 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 Y_RNA.238-201ENST00000364441 102 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 RPL18AP17-201ENST00000455326 198 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC079140.2-201ENST00000506193 142 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 MTCYBP40-201ENST00000509390 1135 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC093259.1-201ENST00000509755 300 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 RNU6-965P-201ENST00000516721 96 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 RNU6-143P-201ENST00000516942 93 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC022784.5-201ENST00000522241 437 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AL133153.1-201ENST00000557756 303 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.85□□□□□ -2.27
LYSMD1Q96S90 MIR5708-201ENST00000579723 85 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC126365.2-201ENST00000580630 379 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AP001981.2-201ENST00000603241 418 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
LYSMD1Q96S90 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 Y_RNA.191-201ENST00000363972 113 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RNU6-944P-201ENST00000364023 107 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RNU6-743P-201ENST00000364151 106 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RNU6-160P-201ENST00000384591 107 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 PIGPP2-201ENST00000411569 458 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AL158053.1-201ENST00000441503 453 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AL096829.2-201ENST00000446582 742 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.84□□□□□ -2.27
LYSMD1Q96S90 TPRKBP1-201ENST00000456243 481 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 MED28P2-201ENST00000475771 317 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RPL30P1-201ENST00000488676 339 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 RPF2P2-201ENST00000504693 896 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 ATP5EP1-201ENST00000510257 156 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AP000860.1-201ENST00000605250 559 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 AL359740.1-201ENST00000624340 592 ntBASIC0.84□□□□□ -2.27
LYSMD1Q96S90 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RNU6-858P-201ENST00000362436 107 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RNU6-655P-201ENST00000362858 107 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RNA5SP493-201ENST00000364115 91 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 JTBP1-201ENST00000441314 247 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC012308.1-201ENST00000451232 178 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AL355472.4-201ENST00000610233 626 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC130454.1-201ENST00000622948 401 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC097460.3-201ENST00000623099 442 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AC231657.1-201ENST00000624313 397 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 AL356094.1-201ENST00000624663 1212 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 MIR3529-201ENST00000637713 78 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.83□□□□□ -2.28
LYSMD1Q96S90 MTND4P21-201ENST00000453886 1357 ntBASIC0.83□□□□□ -2.28
LYSMD1Q96S90 RNU6-112P-201ENST00000363599 104 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RNU6-744P-201ENST00000365557 107 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RNU6-1316P-201ENST00000384242 108 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MIR29B2-201ENST00000385055 81 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC092634.2-201ENST00000428146 1010 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AL078601.1-201ENST00000444542 271 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RPL26P26-201ENST00000480251 434 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RNU6-1225P-201ENST00000516336 65 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 SNORA31.19-201ENST00000517079 126 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 RNA5SP404-201ENST00000517118 132 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MTCO3P15-201ENST00000526563 574 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC109446.2-201ENST00000567872 497 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MIR3169-201ENST00000578032 83 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MIR3937-201ENST00000580135 106 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC060771.1-201ENST00000582031 164 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC005786.1-201ENST00000588553 154 ntBASIC0.82□□□□□ -2.28
LYSMD1Q96S90 AC098483.2-201ENST00000603158 454 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms