Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 RNA5SP213-201ENST00000391031 106 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 UBE2V1P15-201ENST00000407776 448 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AP1B1P2-201ENST00000416196 106 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AC145146.1-201ENST00000496370 254 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AC121161.1-201ENST00000510606 652 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AP005136.1-201ENST00000579765 429 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AC008945.2-201ENST00000606056 604 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AL022345.2-201ENST00000606307 135 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 MIR8084-201ENST00000614105 89 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AC130454.1-201ENST00000622948 401 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.6□□□□□ -2.31
AP1S3Q96PC3 CDR1-202ENST00000625883 1485 ntBASIC0.6□□□□□ -2.31
AP1S3Q96PC3 MIR378A-201ENST00000362177 66 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNU6-744P-201ENST00000365557 107 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNU6-1316P-201ENST00000384242 108 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNU6-166P-201ENST00000384371 107 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 SNORA40C-201ENST00000391285 128 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC108667.1-201ENST00000428618 249 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 HSPE1P9-201ENST00000440046 311 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 SNRPFP4-201ENST00000456366 242 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MED28P2-201ENST00000475771 317 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC103851.1-201ENST00000506833 274 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC009646.1-201ENST00000510455 318 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 PSMC1P5-201ENST00000512850 177 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNU6-351P-201ENST00000516097 100 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNY4P37-201ENST00000516225 96 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 CYCSP23-201ENST00000519781 313 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MIR5094-201ENST00000578766 85 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MIR4293-201ENST00000584305 78 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AP001981.2-201ENST00000603241 418 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AL391646.1-201ENST00000603860 190 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AL021879.1-201ENST00000611756 288 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MIR6857-201ENST00000613267 93 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AC063943.3-201ENST00000615562 356 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 OR4G3P-201ENST00000633500 913 ntBASIC0.59□□□□□ -2.31
AP1S3Q96PC3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.59□□□□□ -2.31
AP1S3Q96PC3 MTND5P35-201ENST00000557537 1720 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 snoU2_19.1-201ENST00000362361 80 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNU6-942P-201ENST00000363002 107 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNU6-288P-201ENST00000363690 104 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 SNORA4.1-201ENST00000364263 144 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 Y_RNA.255-201ENST00000364581 97 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNU6-622P-201ENST00000384272 103 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNU6-843P-201ENST00000384454 104 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AL356776.1-201ENST00000406574 447 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RPL21P111-201ENST00000418453 477 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AL158053.1-201ENST00000441503 453 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNA5SP437-201ENST00000517249 129 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 CBX3P8-201ENST00000532412 525 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC136618.2-201ENST00000575091 400 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC060771.1-201ENST00000582031 164 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 MTCO2P2-201ENST00000591258 225 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC112220.2-201ENST00000605513 533 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC026741.1-201ENST00000605892 482 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC025754.2-201ENST00000606491 432 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AL353997.5-201ENST00000618886 171 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AL356094.1-201ENST00000624663 1212 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 AC092447.10-201ENST00000620607 1652 ntBASIC0.58□□□□□ -2.32
AP1S3Q96PC3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
AP1S3Q96PC3 RNU6-858P-201ENST00000362436 107 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 RNU6-655P-201ENST00000362858 107 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 RNU5B-1-201ENST00000363286 116 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 SNORA4.3-201ENST00000365564 137 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 MIR764-201ENST00000390811 85 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 CBX3P9-201ENST00000402326 552 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AL079342.2-201ENST00000403367 482 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 UBE2V1P10-201ENST00000414685 269 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC005094.1-201ENST00000440420 368 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AL606517.1-201ENST00000446914 387 ntBASIC0.57□□□□□ -2.32
AP1S3Q96PC3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms