| ARAP1 | Q96P48 | MIR4802-201 | ENST00000581881 | 80 nt | BASIC | 0.94 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-1066P-201 | ENST00000363573 | 105 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-637P-201 | ENST00000384050 | 107 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-658P-201 | ENST00000384606 | 106 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MIR146A-201 | ENST00000385201 | 99 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | TRAJ32-201 | ENST00000390505 | 66 nt | APPRIS P1 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MYCBP2-AS2-201 | ENST00000428716 | 428 nt | TSL 5 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AF127577.5-201 | ENST00000449746 | 446 nt | TSL 3 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | SCEL-AS1-201 | ENST00000456280 | 493 nt | TSL 3 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | LINC01495-201 | ENST00000532380 | 421 nt | TSL 2 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | LINC02384-205 | ENST00000539404 | 785 nt | TSL 3 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC096558.1-203 | ENST00000550516 | 574 nt | TSL 3 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AL713866.2-201 | ENST00000603579 | 219 nt | BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | XRCC4-202 | ENST00000338635 | 1579 nt | APPRIS P4 TSL 2 BASIC | 0.93 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | UBE2Q2P1-202 | ENST00000354771 | 883 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-1078P-201 | ENST00000364522 | 103 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | FNDC1-IT1-201 | ENST00000419703 | 516 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MACC1-AS1-201 | ENST00000439285 | 639 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | HGF-207 | ENST00000453018 | 721 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC022445.1-201 | ENST00000457499 | 408 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RPL9P9-202 | ENST00000466501 | 579 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC091047.1-201 | ENST00000533344 | 552 nt | TSL 4 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC005668.1-201 | ENST00000571142 | 476 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC006213.5-201 | ENST00000619673 | 288 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC091965.5-201 | ENST00000624785 | 342 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | ZBTB8OS-201 | ENST00000341885 | 312 nt | TSL 1 (best) BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU4-67P-201 | ENST00000364569 | 141 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-1187P-201 | ENST00000364771 | 110 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-657P-201 | ENST00000383904 | 107 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MCCC1-AS1-201 | ENST00000471731 | 765 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | HMGN1P13-201 | ENST00000505795 | 138 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-581P-201 | ENST00000516214 | 105 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | CYCSP27-201 | ENST00000527643 | 293 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC079917.1-201 | ENST00000527828 | 584 nt | TSL 3 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | PCLAF-207 | ENST00000559519 | 749 nt | TSL 2 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | MIR7515HG-213 | ENST00000585872 | 758 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AL139344.1-201 | ENST00000605228 | 195 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC097717.1-249 | ENST00000608040 | 401 nt | TSL 5 BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AL596245.1-201 | ENST00000618994 | 362 nt | BASIC | 0.92 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | CRISP3-203 | ENST00000371159 | 872 nt | APPRIS ALT2 TSL 5 BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC013267.1-201 | ENST00000458227 | 267 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | RPL21P47-201 | ENST00000483696 | 477 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC010261.1-201 | ENST00000514411 | 457 nt | TSL 5 BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC022861.1-201 | ENST00000522981 | 663 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | AC012414.2-201 | ENST00000559474 | 187 nt | BASIC | 0.91 | □□□□□ -2.26 | | |
| ARAP1 | Q96P48 | SNORD51.1-201 | ENST00000365405 | 77 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AL121578.1-201 | ENST00000428051 | 892 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | TRBVB-201 | ENST00000477100 | 408 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | NDUFAF4P1-201 | ENST00000559425 | 519 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AL355472.4-201 | ENST00000610233 | 626 nt | BASIC | 0.9 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC092125.1-201 | ENST00000562568 | 1995 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | KIF20B-201 | ENST00000260753 | 6306 nt | APPRIS P3 TSL 1 (best) BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RNU6-28P-201 | ENST00000362378 | 107 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | SNORD33-201 | ENST00000362761 | 85 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RNU1-39P-201 | ENST00000383897 | 165 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | SNORD14D-201 | ENST00000384390 | 87 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC092634.6-201 | ENST00000418558 | 192 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | Z95118.1-201 | ENST00000421372 | 247 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MTCO2P5-201 | ENST00000422621 | 426 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MTND1P28-201 | ENST00000435623 | 950 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AL391704.1-202 | ENST00000453889 | 874 nt | TSL 3 BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AKIRIN2P1-201 | ENST00000505898 | 352 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | LINC01897-203 | ENST00000591503 | 369 nt | TSL 2 BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC091057.3-201 | ENST00000602684 | 733 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | NDUFA8P1-201 | ENST00000605525 | 367 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC034229.4-201 | ENST00000607861 | 441 nt | BASIC | 0.89 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RNU6-611P-201 | ENST00000384276 | 104 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | TRAJ40-201 | ENST00000390497 | 61 nt | APPRIS P1 BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | DIAPH3-AS1-201 | ENST00000422052 | 428 nt | TSL 3 BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RAC1P8-201 | ENST00000427086 | 527 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | snoU13.8-201 | ENST00000458890 | 104 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MEMO1P3-201 | ENST00000459811 | 302 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | PTP4A1P4-201 | ENST00000512479 | 322 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RAB11AP2-201 | ENST00000545905 | 639 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | HMGN1P30-201 | ENST00000589286 | 268 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RPL30P11-203 | ENST00000598995 | 310 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RNU6-91P-201 | ENST00000607774 | 107 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC009237.15-201 | ENST00000610252 | 501 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC245060.5-201 | ENST00000610778 | 3293 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | MIR5087-201 | ENST00000635826 | 76 nt | BASIC | 0.88 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | DYNLT3P2-201 | ENST00000442517 | 295 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AL161937.1-201 | ENST00000444478 | 425 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC092001.1-201 | ENST00000453012 | 261 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | RPL30P7-201 | ENST00000479312 | 323 nt | BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | PPFIA2-AS1-205 | ENST00000550938 | 790 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |
| ARAP1 | Q96P48 | AC069061.2-202 | ENST00000580280 | 357 nt | TSL 3 BASIC | 0.87 | □□□□□ -2.27 | | |