Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AC114981.1-201ENST00000503897 678 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AC114811.1-201ENST00000507207 168 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 RNU2-12P-201ENST00000517216 168 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.25□□□□□ -2.45
CFAP54Q96N23 MIR103A1-201ENST00000362165 78 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 MIR1250-201ENST00000408098 113 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AC243964.1-201ENST00000441814 261 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AC084024.2-201ENST00000503480 791 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 AL391597.1-201ENST00000618707 694 ntBASIC-0.25□□□□□ -2.45
CFAP54Q96N23 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 SNORD75.1-201ENST00000408373 60 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AL353777.1-201ENST00000425552 326 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AC027119.1-201ENST00000440877 241 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AC092001.1-201ENST00000453012 261 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 ZNF92P3-201ENST00000596594 954 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 RNU6-10P-201ENST00000384036 107 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 RNU6-15P-201ENST00000384534 107 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AC010631.1-201ENST00000474150 156 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.26□□□□□ -2.45
CFAP54Q96N23 PCNAP1-202ENST00000595299 752 ntBASIC-0.26□□□□□ -2.45
CFAP54Q96N23 RNA5SP125-201ENST00000364843 120 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 MIR196A2-201ENST00000385189 110 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC116347.2-201ENST00000514912 523 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC093023.1-201ENST00000547375 507 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC068276.1-201ENST00000605793 379 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC006963.1-201ENST00000624003 1052 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNA5SP275-201ENST00000363936 118 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNU6-657P-201ENST00000383904 107 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 MIR218-1-201ENST00000384999 110 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNA5SP255-201ENST00000516370 107 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 NRON-201ENST00000517270 370 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC040896.1-201ENST00000613819 479 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 RNU6-952P-201ENST00000391164 108 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC073261.1-201ENST00000429409 121 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC098869.1-201ENST00000481627 292 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.27□□□□□ -2.45
CFAP54Q96N23 CYP3A52P-201ENST00000563326 91 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AC110792.4-201ENST00000609843 298 ntBASIC-0.27□□□□□ -2.45
CFAP54Q96N23 AL109913.1-201ENST00000421173 514 ntBASIC-0.28□□□□□ -2.45
CFAP54Q96N23 RAC1P8-201ENST00000427086 527 ntBASIC-0.28□□□□□ -2.45
CFAP54Q96N23 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC-0.28□□□□□ -2.45
CFAP54Q96N23 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.28□□□□□ -2.45
CFAP54Q96N23 AL391994.1-201ENST00000254724 282 ntBASIC-0.28□□□□□ -2.45
CFAP54Q96N23 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.28□□□□□ -2.45
CFAP54Q96N23 MICF-203ENST00000432679 129 ntBASIC-0.28□□□□□ -2.45
CFAP54Q96N23 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.28□□□□□ -2.45
CFAP54Q96N23 RNU4-7P-201ENST00000364758 141 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 MIR518D-201ENST00000385014 87 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 MIR493-201ENST00000385254 89 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 RPL26P27-201ENST00000414397 437 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 SNORA40.12-201ENST00000516329 111 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AC022523.2-201ENST00000561045 150 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AC090330.1-201ENST00000588646 764 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 U4atac.1-201ENST00000618345 95 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Z99571.1-201ENST00000636677 394 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 RNU2-36P-201ENST00000410361 191 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 RPS3AP1-201ENST00000413190 320 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.29□□□□□ -2.46
CFAP54Q96N23 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.29□□□□□ -2.46
CFAP54Q96N23 VPS26AP1-201ENST00000483197 979 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AC108729.1-201ENST00000487812 947 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 HMGB1P22-201ENST00000505315 124 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CFAP54Q96N23 OR5T3-201ENST00000303059 1023 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
CFAP54Q96N23 DHFRP6-201ENST00000401776 268 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 NCOR1P3-201ENST00000420479 303 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 RNA5SP137-201ENST00000516833 135 ntBASIC-0.29□□□□□ -2.46
CFAP54Q96N23 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.29□□□□□ -2.46
CFAP54Q96N23 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 snoU13.4-201ENST00000458916 104 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 AC023194.1-201ENST00000493084 308 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
CFAP54Q96N23 MIR6738-201ENST00000619620 64 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.3□□□□□ -2.46
CFAP54Q96N23 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms