Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 HMGN2P26-201ENST00000463169 339 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC083904.1-201ENST00000487828 231 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-323P-201ENST00000521915 107 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AP002404.1-201ENST00000532005 451 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 PSMA3P-201ENST00000555485 635 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 BNIP3P16-201ENST00000589779 534 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 BNIP3P25-201ENST00000596023 559 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 VN1R107P-201ENST00000601784 209 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AP003465.2-201ENST00000602571 373 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AL357078.3-201ENST00000607528 618 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC090115.4-201ENST00000609970 188 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC097372.5-201ENST00000623665 376 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC002543.1-201ENST00000299783 1954 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 U3.12-201ENST00000364498 214 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 MIR186-201ENST00000384988 86 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 RNU6-293P-201ENST00000411259 106 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 RN7SL542P-201ENST00000467147 294 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 RPL30P12-201ENST00000474666 353 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC092989.1-201ENST00000481235 277 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC106707.2-201ENST00000484182 374 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AK3P2-201ENST00000507976 429 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC103996.1-201ENST00000555468 102 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 AL020991.1-201ENST00000612314 373 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
CMTM3Q96MX0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CMTM3Q96MX0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 RNU1-72P-201ENST00000362976 153 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.373-201ENST00000365600 103 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 SNORD15B-201ENST00000384714 146 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC008267.5-201ENST00000424928 265 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 MRPS10P2-201ENST00000431226 381 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC243964.1-201ENST00000441814 261 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 RPL21P23-201ENST00000446654 460 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 RPL39P29-201ENST00000447779 157 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC073901.1-201ENST00000462471 408 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AP000852.1-201ENST00000472460 573 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 RPS29P25-201ENST00000481709 171 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC140059.1-201ENST00000489238 361 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC008526.1-201ENST00000509149 338 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC108043.1-201ENST00000512696 574 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC026403.1-201ENST00000518938 295 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC090136.1-201ENST00000520009 240 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 HPRT1P3-201ENST00000539521 576 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC011611.1-201ENST00000552179 197 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 MIR203B-201ENST00000636080 86 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 AC009093.8-201ENST00000641769 292 ntBASIC2.62□□□□□ -1.99
CMTM3Q96MX0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.62□□□□□ -1.99
CMTM3Q96MX0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 SNORA67.1-201ENST00000364749 141 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 RNU6-1222P-201ENST00000384615 107 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MIR544A-201ENST00000384855 91 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 SNORD73A-201ENST00000386062 65 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 RNU6-1106P-201ENST00000390845 107 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MIR1277-201ENST00000408536 78 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 RNA5SP118-201ENST00000410385 109 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC003685.2-201ENST00000422795 395 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MTCO2P3-201ENST00000442543 421 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 snoU13.14-201ENST00000459372 104 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms