Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL31P13-201ENST00000484151 370 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 RNU6-572P-201ENST00000516724 80 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC022616.4-201ENST00000522985 181 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC110588.1-201ENST00000559699 137 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 MIR4273-201ENST00000582824 84 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AL645944.1-201ENST00000603857 493 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC009314.1-201ENST00000603871 304 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC004805.2-201ENST00000605382 482 ntBASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHAMP1Q96JM3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 MAPK10-373ENST00000641983 6772 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 RNU4-42P-201ENST00000364738 142 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 Z82210.1-201ENST00000440037 231 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AL357552.1-201ENST00000445254 415 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AP002404.1-201ENST00000532005 451 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AC103996.1-201ENST00000555468 102 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 MIR5701-3-201ENST00000578890 82 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 MIR5188-201ENST00000583467 113 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 MIR5701-1-201ENST00000585138 82 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AL021879.1-201ENST00000611756 288 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AL161629.2-201ENST00000615347 275 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 MIR5701-2-201ENST00000615634 82 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 AC007496.3-201ENST00000624987 3443 ntBASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CHAMP1Q96JM3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 RNU6-702P-201ENST00000364982 107 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 RNU6-301P-201ENST00000384277 107 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 MIR1302-3-201ENST00000408128 138 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 RNU6-101P-201ENST00000410323 104 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 RPL21P66-201ENST00000426566 466 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC133134.1-201ENST00000466800 359 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 RN7SL594P-201ENST00000470590 287 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC021205.2-201ENST00000480069 347 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 SNORA40.14-201ENST00000516543 86 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 SCARNA20.6-201ENST00000517251 106 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHAMP1Q96JM3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC005476.1-201ENST00000554427 397 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 AL355297.3-201ENST00000604082 446 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC005046.1-201ENST00000608515 625 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 AC107871.2-201ENST00000612894 502 ntBASIC4□□□□□ -1.77
CHAMP1Q96JM3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHAMP1Q96JM3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4□□□□□ -1.77
CHAMP1Q96JM3 RNY3P11-201ENST00000364153 102 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RNU6-933P-201ENST00000384424 107 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 MIR607-201ENST00000385241 96 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RNU2-68P-201ENST00000410878 191 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RNA5SP31-201ENST00000411144 127 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 CBX3P6-201ENST00000430257 527 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RPS15AP10-201ENST00000432472 382 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 SNRPEP9-201ENST00000436794 238 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 U3.44-201ENST00000458938 192 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RPS29P27-201ENST00000463711 170 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RN7SL283P-201ENST00000489055 303 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 MRPS35P2-201ENST00000508242 191 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 RNA5SP291-201ENST00000517222 105 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 HSBP1P1-201ENST00000555205 166 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC008121.1-201ENST00000603244 268 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 AC016727.2-201ENST00000603988 621 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 Z98751.3-201ENST00000604447 521 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 MIR8076-201ENST00000611401 83 ntBASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHAMP1Q96JM3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 ZNF72P-201ENST00000425869 1908 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 RNU6-428P-201ENST00000362942 107 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 SNORD50.1-201ENST00000362987 71 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 RNU6-238P-201ENST00000363313 106 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms