Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.25□□□□□ -2.05
PTP4A1Q93096 OR2AS2P-201ENST00000606902 342 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC073114.1-201ENST00000612027 490 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC092608.2-201ENST00000624427 218 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 Z69720.2-201ENST00000624755 279 ntBASIC2.25□□□□□ -2.05
PTP4A1Q93096 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTP4A1Q93096 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTP4A1Q93096 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-1159P-201ENST00000362933 107 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-181P-201ENST00000363225 107 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 SNORA5B-201ENST00000363786 132 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-434P-201ENST00000384376 107 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RPS4XP8-201ENST00000402039 771 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNA5SP184-201ENST00000411071 108 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU2-32P-201ENST00000411193 191 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RN7SKP142-201ENST00000411236 328 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 MORF4L1P6-201ENST00000418771 268 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 DNAJC19P4-201ENST00000440115 345 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RPL39P29-201ENST00000447779 157 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RPL30P12-201ENST00000474666 353 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.24□□□□□ -2.05
PTP4A1Q93096 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-377P-201ENST00000515965 102 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-445P-201ENST00000516949 107 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 RNU6-667P-201ENST00000517186 102 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 AP000889.2-201ENST00000532684 490 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.24□□□□□ -2.05
PTP4A1Q93096 AL391840.1-201ENST00000571144 367 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 AC091135.1-201ENST00000585943 307 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 AC008147.4-201ENST00000617570 1204 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 U4.7-201ENST00000638126 106 ntBASIC2.24□□□□□ -2.05
PTP4A1Q93096 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTP4A1Q93096 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PTP4A1Q93096 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PTP4A1Q93096 MTND4P14-201ENST00000435799 1354 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PTP4A1Q93096 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PTP4A1Q93096 SNORD62.1-201ENST00000362541 86 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 RNU6-611P-201ENST00000384276 104 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 RNU6-393P-201ENST00000384475 107 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 RNU6-1222P-201ENST00000384615 107 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 MIR196B-201ENST00000384852 84 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 RNU2-52P-201ENST00000410680 190 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 CYCSP33-201ENST00000414485 327 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC098826.1-201ENST00000433943 471 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 AL031659.1-201ENST00000447075 539 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 RPL30P1-201ENST00000488676 339 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC018868.1-201ENST00000491307 315 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC117532.1-201ENST00000514638 323 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 RNA5SP356-201ENST00000515972 94 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 MIR4703-201ENST00000577728 79 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 AC009090.3-201ENST00000616553 565 ntBASIC2.23□□□□□ -2.05
PTP4A1Q93096 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.23□□□□□ -2.05
PTP4A1Q93096 ZNF658B-202ENST00000615961 3375 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PTP4A1Q93096 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 RNU6-1274P-201ENST00000384557 107 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 RNU2-29P-201ENST00000410423 189 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 CETN4P-201ENST00000432407 469 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 C1DP4-201ENST00000455429 424 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC006512.1-201ENST00000468816 291 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC079382.1-201ENST00000493346 557 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 HMGB1P35-201ENST00000503360 598 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 MTCO3P7-201ENST00000510008 774 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC105417.1-201ENST00000514691 285 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 Y_RNA.695-201ENST00000516715 107 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC007834.2-201ENST00000536310 343 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.22□□□□□ -2.05
PTP4A1Q93096 SUB1P2-201ENST00000556401 297 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
PTP4A1Q93096 AC062016.1-201ENST00000355719 319 ntBASIC2.21□□□□□ -2.06
PTP4A1Q93096 RNU6-1120P-201ENST00000362988 108 ntBASIC2.21□□□□□ -2.06
PTP4A1Q93096 BTF3P7-201ENST00000407097 488 ntBASIC2.21□□□□□ -2.06
PTP4A1Q93096 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.21□□□□□ -2.06
PTP4A1Q93096 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.21□□□□□ -2.06
PTP4A1Q93096 WARS2P1-201ENST00000429678 537 ntBASIC2.21□□□□□ -2.06
PTP4A1Q93096 ARL5AP4-201ENST00000430731 512 ntBASIC2.21□□□□□ -2.06
PTP4A1Q93096 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.21□□□□□ -2.06
PTP4A1Q93096 AC007969.2-201ENST00000441891 191 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms