Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC117440.1-201ENST00000474107 571 ntBASIC7.02□□□□□ -1.29
TRIM41Q8WV44 SNORA31.19-201ENST00000517079 126 ntBASIC7.02□□□□□ -1.29
TRIM41Q8WV44 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM41Q8WV44 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM41Q8WV44 RNU1-15P-201ENST00000353977 144 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 RNU5E-9P-201ENST00000411164 104 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AC006011.1-201ENST00000442758 349 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 SSXP4-201ENST00000451349 245 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 RPL23AP75-201ENST00000491601 451 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AK6P2-201ENST00000549020 471 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 RPL23AP88-201ENST00000605759 454 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 5S_rRNA.16-201ENST00000612928 119 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AC131238.1-201ENST00000617135 328 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 SMCR2_2.1-201ENST00000619783 161 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 SCARNA4-201ENST00000629045 128 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AC107027.3-201ENST00000565095 3473 ntBASIC7.01□□□□□ -1.29
TRIM41Q8WV44 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRIM41Q8WV44 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC7□□□□□ -1.29
TRIM41Q8WV44 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC7□□□□□ -1.29
TRIM41Q8WV44 UBE2WP1-201ENST00000362030 340 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.245-201ENST00000364493 95 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 RNU6-449P-201ENST00000383914 107 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.435-201ENST00000384095 112 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.441-201ENST00000384123 112 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 RNU6-541P-201ENST00000384709 110 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 AL162725.1-201ENST00000435405 301 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 IGLV3-26-201ENST00000520756 302 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC7□□□□□ -1.29
TRIM41Q8WV44 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 AC006386.2-201ENST00000624491 75 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 AC012005.1-201ENST00000624575 75 ntBASIC7□□□□□ -1.29
TRIM41Q8WV44 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC7□□□□□ -1.29
TRIM41Q8WV44 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM41Q8WV44 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 RNU6-626P-201ENST00000363354 107 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.262-201ENST00000364641 102 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.446-201ENST00000384178 104 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 SNORD20-201ENST00000384550 80 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.597-201ENST00000410463 100 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.629-201ENST00000411368 105 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 AC124916.1-201ENST00000444020 547 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 RPL23AP3-201ENST00000453844 468 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 KC877373.1-201ENST00000479066 408 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 RPL32P34-201ENST00000486380 400 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 Vault.1-201ENST00000516474 102 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 RNA5SP290-201ENST00000517133 127 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 AP005660.1-201ENST00000522972 293 ntBASIC6.99□□□□□ -1.29
TRIM41Q8WV44 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
TRIM41Q8WV44 AC092435.4-201ENST00000623012 4159 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 RNU6-658P-201ENST00000384606 106 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.568-201ENST00000384742 113 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 AC009237.7-201ENST00000447357 229 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 UQCRBP2-201ENST00000447827 297 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 FABP5P15-201ENST00000453566 214 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 Y_RNA.676-201ENST00000516393 96 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 LARP7P3-201ENST00000579888 337 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 U4.7-201ENST00000638126 106 ntBASIC6.98□□□□□ -1.29
TRIM41Q8WV44 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
TRIM41Q8WV44 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TRIM41Q8WV44 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM41Q8WV44 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM41Q8WV44 FTLP6-201ENST00000355274 422 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 RNU6-1175P-201ENST00000365200 107 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 RNU6-20P-201ENST00000384106 107 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 MIR153-1-201ENST00000384914 90 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 AC007919.1-201ENST00000429380 217 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 AL160314.1-201ENST00000490836 438 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 AC139453.3-201ENST00000493276 369 ntBASIC6.97□□□□□ -1.29
TRIM41Q8WV44 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM41Q8WV44 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms