Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 RNU6-766P-201ENST00000362478 107 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 U1.1-201ENST00000384101 164 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 SNORA18.3-201ENST00000384122 132 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 MIRLET7F2-201ENST00000385277 83 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 SNRPGP8-201ENST00000454064 226 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 RNU6-412P-201ENST00000516434 106 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 MIR3921-201ENST00000577308 85 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AC025946.2-201ENST00000603398 234 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AC136601.2-201ENST00000604356 474 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AC100757.1-201ENST00000616872 1835 ntBASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 RNU6-756P-201ENST00000383997 107 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 SNORA48.7-201ENST00000391302 135 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 RPL27AP8-201ENST00000424277 446 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AL591623.2-201ENST00000449978 222 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 RPL31P41-201ENST00000477967 372 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AC006445.2-201ENST00000510061 472 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AC107918.3-201ENST00000533272 382 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 CR383656.8-201ENST00000549046 145 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AC006349.1-201ENST00000555526 235 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AL356575.1-201ENST00000603008 283 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 MIR6853-201ENST00000619642 74 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 MARK2P15-201ENST00000432204 2186 ntBASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNIP1Q8TAD8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 MIR153-1-201ENST00000384914 90 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 SNORA26.3-201ENST00000391119 136 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 SNORA79-201ENST00000408376 140 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 BX323845.1-201ENST00000432417 179 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 RPL21P129-201ENST00000491732 478 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 RNA5SP464-201ENST00000516251 108 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 AC104260.2-201ENST00000623551 3497 ntBASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNIP1Q8TAD8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 MTND5P18-201ENST00000445624 1801 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 Y_RNA.243-201ENST00000364481 109 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 RNA5SP515-201ENST00000364570 118 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 Y_RNA.281-201ENST00000364774 94 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 RNU6-1107P-201ENST00000364817 104 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 Y_RNA.328-201ENST00000365208 113 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 MIR589-201ENST00000385238 99 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 SNORA68.2-201ENST00000391263 128 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 EDDM3CP-201ENST00000415977 425 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 RNA5SP103-201ENST00000459503 118 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC026402.1-201ENST00000513642 170 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 Y_RNA.690-201ENST00000516603 95 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC018630.3-201ENST00000542637 96 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC053481.4-201ENST00000583164 216 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 AC025521.1-201ENST00000621624 286 ntBASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SNIP1Q8TAD8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms