Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AL353752.1-201ENST00000454946 260 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC010631.1-201ENST00000474150 156 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC098869.1-201ENST00000481627 292 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC093809.1-201ENST00000509155 340 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC022022.2-201ENST00000602989 360 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 BNIP3P31-201ENST00000604515 566 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC104465.1-201ENST00000611365 139 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC099654.9-201ENST00000637055 678 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 ELL2P3-201ENST00000457883 1602 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 Y_RNA.25-201ENST00000362528 102 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-432P-201ENST00000384196 109 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-622P-201ENST00000384272 103 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-482P-201ENST00000391068 107 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC063976.4-201ENST00000421971 163 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 SNRPEP7-201ENST00000438350 220 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AL358794.1-201ENST00000445689 381 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RPL37P6-201ENST00000460682 294 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RNU5A-4P-201ENST00000516588 111 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC027807.1-201ENST00000559921 996 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 HMGB1P33-201ENST00000563485 527 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 MIR4303-201ENST00000581299 66 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 RN7SL622P-201ENST00000585292 275 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC107304.1-201ENST00000604229 296 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC010975.3-201ENST00000618727 978 ntBASIC0.28□□□□□ -2.36
SPTSSBQ8NFR3 AC010615.1-201ENST00000594254 1764 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AL391994.1-201ENST00000254724 282 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 RNU4-79P-201ENST00000362764 141 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 CYCSP33-201ENST00000414485 327 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC002429.1-201ENST00000437672 148 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-390P-201ENST00000516259 103 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-572P-201ENST00000516724 80 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AL590705.4-201ENST00000532209 134 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 MIR4698-201ENST00000577795 80 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 VN1R83P-201ENST00000595685 445 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 BNIP3P33-201ENST00000598912 569 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC090578.1-201ENST00000604955 591 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC105148.1-201ENST00000604961 409 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 SCARNA15.3-201ENST00000626315 122 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 SCARNA4.1-201ENST00000628597 123 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 MIR3529-201ENST00000637713 78 ntBASIC0.27□□□□□ -2.37
SPTSSBQ8NFR3 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-97P-201ENST00000363387 104 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 MIR10B-201ENST00000385011 110 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-1176P-201ENST00000390955 107 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-932P-201ENST00000391108 106 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 RNU2-23P-201ENST00000410545 195 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC244023.1-201ENST00000426884 112 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC104651.1-201ENST00000427559 735 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AL121578.1-201ENST00000428051 892 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 MTND4LP14-201ENST00000429447 288 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 CETN4P-201ENST00000432407 469 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 RNA5SP255-201ENST00000516370 107 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 SNORD60.2-201ENST00000516883 86 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC018659.1-201ENST00000551083 169 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AL121579.1-201ENST00000555129 305 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 BNIP3P30-201ENST00000601184 574 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 AC243994.1-201ENST00000618627 109 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms