Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RNU6-843P-201ENST00000384454 104 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC068533.2-201ENST00000411872 306 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AP1B1P2-201ENST00000416196 106 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 EIF1P1-201ENST00000421436 341 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 FTH1P12-201ENST00000432137 551 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC005094.1-201ENST00000440420 368 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 KATNBL1P3-201ENST00000443475 909 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 RNU7-59P-201ENST00000459101 61 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 MTND1P16-201ENST00000465177 898 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 RPL9P9-202ENST00000466501 579 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 RPL39P36-201ENST00000490784 156 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC079148.1-201ENST00000565944 819 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC025678.1-201ENST00000567861 338 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC136618.2-201ENST00000575091 400 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC004987.4-201ENST00000603383 338 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 AC097460.3-201ENST00000623099 442 ntBASIC0.73□□□□□ -2.29
NUP35Q8NFH5 MIR378A-201ENST00000362177 66 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 RNA5SP99-201ENST00000364020 114 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 RNU6-289P-201ENST00000364093 107 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 RNU4-38P-201ENST00000364472 129 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 SNORA29-201ENST00000384183 140 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 RNU6-166P-201ENST00000384371 107 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 SNORA40C-201ENST00000391285 128 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 Y_RNA.597-201ENST00000410463 100 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC016831.2-201ENST00000417179 352 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 BTF3P4-201ENST00000418852 495 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 EBAG9P1-201ENST00000418955 543 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 RPS6P15-201ENST00000431996 751 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 HSPE1P9-201ENST00000440046 311 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC021451.1-201ENST00000523498 1129 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC137800.2-201ENST00000574375 120 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP35Q8NFH5 MIR6078-201ENST00000611069 100 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 AL589994.2-201ENST00000621124 579 ntBASIC0.72□□□□□ -2.29
NUP35Q8NFH5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 Y_RNA.40-201ENST00000362645 93 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 SNORD114-6-201ENST00000364393 72 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-487P-201ENST00000365430 104 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-701P-201ENST00000384059 107 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-968P-201ENST00000384076 107 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-296P-201ENST00000384608 107 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 MIR301A-201ENST00000385261 86 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-482P-201ENST00000391068 107 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC004965.1-201ENST00000413033 213 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AL161935.2-201ENST00000414627 60 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 MRPS36P1-201ENST00000421291 307 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 FO393414.1-201ENST00000428697 1184 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AL606517.1-201ENST00000446914 387 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AL353752.1-201ENST00000454946 260 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 HMGB1P30-201ENST00000492455 606 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNY4P37-201ENST00000516225 96 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 RNU6-64P-201ENST00000517119 105 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.71□□□□□ -2.3
NUP35Q8NFH5 MIR4524B-201ENST00000581569 115 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 VN1R80P-201ENST00000597126 338 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC069545.1-201ENST00000605671 358 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AL021879.1-201ENST00000611756 288 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC063943.3-201ENST00000615562 356 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC123767.1-202ENST00000620407 817 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC009033.1-201ENST00000624279 431 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 AC095038.3-201ENST00000634439 195 ntBASIC0.71□□□□□ -2.3
NUP35Q8NFH5 MTND4P21-201ENST00000453886 1357 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 AL391987.6-201ENST00000305671 199 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
NUP35Q8NFH5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 RNU6-354P-201ENST00000383862 107 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 RNU6-610P-201ENST00000384264 107 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 RNU2-7P-201ENST00000410794 178 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 USP9YP33-201ENST00000412220 421 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 RPS12P24-201ENST00000412619 387 ntBASIC0.7□□□□□ -2.3
NUP35Q8NFH5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms