Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 Z84480.1-201ENST00000605131 311 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 CTSLP2-204ENST00000629029 392 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTL3Q8N8U3 AC103710.2-202ENST00000641454 2853 ntBASIC2.49□□□□□ -2.01
RTL3Q8N8U3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC138393.1-203ENST00000327086 343 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.9-201ENST00000362354 101 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 RNU6-641P-201ENST00000384006 107 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 Y_RNA.450-201ENST00000384198 113 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL139095.1-201ENST00000404326 391 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL590002.1-201ENST00000406554 418 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 EIF4EP4-201ENST00000424916 578 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 MTATP6P13-201ENST00000438531 667 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC016691.1-201ENST00000441321 413 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 RPL7P12-201ENST00000446719 750 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC027673.1-201ENST00000456245 405 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 CKS1BP2-201ENST00000497342 240 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL117351.2-201ENST00000513571 157 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 SMURF2P1-201ENST00000514992 481 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 RNU6-835P-201ENST00000516974 104 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL133241.1-201ENST00000556832 487 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC025678.1-201ENST00000567861 338 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC093788.1-201ENST00000609356 927 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC024940.5-201ENST00000622889 474 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AC244517.12-201ENST00000623581 663 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 AL160394.1-201ENST00000624765 724 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 MIR3688-2-201ENST00000636963 87 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 MIR1321-201ENST00000637766 79 ntBASIC2.48□□□□□ -2.01
RTL3Q8N8U3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.48□□□□□ -2.01
RTL3Q8N8U3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU6-166P-201ENST00000384371 107 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU6-908P-201ENST00000410160 94 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU2-9P-201ENST00000410194 145 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU6-387P-201ENST00000411331 105 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC003685.2-201ENST00000422795 395 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU6-261P-201ENST00000459506 102 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 GMFBP1-201ENST00000467831 427 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RPS27P27-201ENST00000498779 255 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC234781.5-201ENST00000508429 271 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC105417.1-201ENST00000514691 285 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 RNU6-685P-201ENST00000517088 95 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AP005435.4-201ENST00000529514 284 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 ADI1P3-201ENST00000549509 470 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL512360.1-201ENST00000555346 234 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 BNIP3P30-201ENST00000601184 574 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL670379.10-201ENST00000604330 253 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AL670379.9-201ENST00000605428 253 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC011155.2-201ENST00000623202 216 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC025034.2-201ENST00000623264 286 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC006020.1-201ENST00000420179 1854 ntBASIC2.47□□□□□ -2.01
RTL3Q8N8U3 AC007336.1-201ENST00000576365 3828 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RNU6-179P-201ENST00000363350 107 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.256-201ENST00000364594 104 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 SNORD115-7-201ENST00000365306 82 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.402-201ENST00000383972 102 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms