Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 RPL21P90-201ENST00000415692 466 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 RPL7P54-201ENST00000438336 674 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 RPL38P4-201ENST00000502376 214 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC116562.3-201ENST00000506136 177 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 Vault.3-201ENST00000516676 95 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC068587.5-201ENST00000528506 175 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC087241.2-201ENST00000535801 324 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 ELOCP5-201ENST00000604924 333 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC091304.9-201ENST00000612091 226 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 AL160394.1-201ENST00000624765 724 ntBASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
HDDC3Q8N4P3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 RNY4P34-201ENST00000364779 95 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 SNORA26.9-201ENST00000391322 122 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL023284.1-201ENST00000403956 276 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL031577.2-201ENST00000404133 280 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 RAP1BP3-201ENST00000407180 549 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC104850.1-201ENST00000435940 476 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 HMGB1P31-201ENST00000437242 427 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL136380.1-201ENST00000447970 162 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 HMGB1P35-201ENST00000503360 598 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 MTND1P22-201ENST00000510572 951 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 SCARNA24.1-201ENST00000516465 137 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 RNU2-46P-201ENST00000517038 113 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 RNU6-1220P-201ENST00000517126 108 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 MIR3682-201ENST00000581338 84 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC090897.2-201ENST00000581715 130 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC011494.1-201ENST00000596454 237 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AP000942.3-201ENST00000603702 160 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL121992.2-201ENST00000606262 256 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC122133.1-201ENST00000613964 233 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AC008250.2-201ENST00000615261 205 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 AL359740.1-201ENST00000624340 592 ntBASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HDDC3Q8N4P3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 RNU6-553P-201ENST00000364047 96 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 U3.13-201ENST00000364804 214 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 RNU6-384P-201ENST00000364900 104 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 RNU6-622P-201ENST00000384272 103 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AL031779.1-201ENST00000415663 330 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 CALM2P2-201ENST00000428512 440 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC073614.1-201ENST00000438690 650 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 MTND6P13-201ENST00000443510 523 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AL360271.2-201ENST00000447710 161 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC018868.1-201ENST00000491307 315 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 RNU6-759P-201ENST00000516740 103 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 RNU6-667P-201ENST00000517186 102 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 SNORA31.23-201ENST00000517219 133 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC009318.2-201ENST00000610917 651 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC138649.3-201ENST00000622154 254 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 U6.114-201ENST00000636407 96 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 AC005336.3-201ENST00000623833 2679 ntBASIC2.17□□□□□ -2.06
HDDC3Q8N4P3 SNORA40.19-201ENST00000390846 128 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 EEF1A1P40-201ENST00000412883 573 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 MTATP6P16-201ENST00000434543 526 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 DNAJC19P4-201ENST00000440115 345 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AL137159.1-201ENST00000452808 512 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 PMCHL2-203ENST00000457791 237 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 RAP1BP2-201ENST00000478270 544 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AP000763.2-201ENST00000540641 163 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 SNRPGP17-201ENST00000603780 214 ntBASIC2.16□□□□□ -2.06
HDDC3Q8N4P3 AC009159.2-201ENST00000617603 606 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms