Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC008669.1-201ENST00000565823 2178 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC118273.1-201ENST00000525324 3006 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-512P-201ENST00000364438 103 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-384P-201ENST00000364900 104 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU1-140P-201ENST00000365040 165 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-1026P-201ENST00000384465 108 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 SNORA44-201ENST00000384584 132 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.556-201ENST00000384677 113 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-101P-201ENST00000410323 104 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 Z85995.1-201ENST00000415547 335 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 HMGN2P7-201ENST00000456186 273 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC084357.1-201ENST00000473404 255 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RN7SL429P-201ENST00000479090 223 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RN7SL489P-201ENST00000486185 223 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RN7SL327P-201ENST00000488659 223 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RPL17P19-201ENST00000489069 552 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC018437.1-201ENST00000492214 406 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 VN1R104P-201ENST00000505115 1009 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 SNORA31.20-201ENST00000517111 133 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-264P-201ENST00000517134 104 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 CBX3P8-201ENST00000532412 525 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 TRAV37-201ENST00000553906 342 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC011373.1-201ENST00000607270 237 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC107294.1-201ENST00000609524 467 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RN7SL853P-201ENST00000617250 223 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A3Q8N4M1 AL035425.3-201ENST00000564206 4996 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RNA5SP197-201ENST00000363357 119 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RNU4-42P-201ENST00000364738 142 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.512-201ENST00000384518 102 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-325P-201ENST00000411132 105 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 TOMM22P1-201ENST00000418578 312 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RPL23AP50-201ENST00000434149 455 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RPL21P2-201ENST00000440049 481 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AC025750.2-201ENST00000442609 450 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 RPL23AP31-201ENST00000456160 467 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AL136097.1-201ENST00000456945 913 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AL049874.1-201ENST00000489560 388 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 MIR892C-201ENST00000516410 77 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AP004371.1-201ENST00000525240 214 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 FAM60BP-201ENST00000578364 658 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 Z98751.3-201ENST00000604447 521 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 AC093732.2-201ENST00000607950 274 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 MIR7106-201ENST00000612419 65 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A3Q8N4M1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-238P-201ENST00000363313 106 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 SNORA5B-201ENST00000363786 132 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RNU6-395P-201ENST00000365662 106 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.476-201ENST00000384347 108 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 Y_RNA.577-201ENST00000384794 101 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RPL21P1-201ENST00000399532 476 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AL031121.1-201ENST00000406553 254 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 MIR1252-201ENST00000408861 65 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AL592148.1-201ENST00000413568 445 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AL353997.1-201ENST00000432936 108 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 CECR9-201ENST00000453421 199 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 FABP5P15-201ENST00000453566 214 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC008571.1-201ENST00000467232 300 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 RPS15AP34-201ENST00000487776 387 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC131281.1-201ENST00000522984 164 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A3Q8N4M1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms