Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHTF2Q8N3S3 Y_RNA.7-201ENST00000362352 102 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 RNU1-62P-201ENST00000362599 164 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 RNU1-20P-201ENST00000363314 162 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 Y_RNA.571-201ENST00000384753 98 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 RPL21P17-201ENST00000397467 475 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 BPY2DP-201ENST00000422208 265 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AP000873.1-201ENST00000463987 400 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AC090525.1-201ENST00000479116 478 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 RNU6-928P-201ENST00000516876 104 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AC015912.2-201ENST00000571053 181 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 MIR3939-201ENST00000582614 106 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AC114781.5-201ENST00000615297 108 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AC073308.1-201ENST00000623696 305 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 AC068724.3-201ENST00000625906 87 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 CUL1P1-201ENST00000509510 2425 ntBASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.65□□□□□ -1.67
PHTF2Q8N3S3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC092435.4-201ENST00000623012 4159 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 SNORD116-18-201ENST00000383961 92 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 SNORA18.3-201ENST00000384122 132 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 RNU2-54P-201ENST00000410299 190 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC009237.10-201ENST00000414112 510 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 Z74021.1-201ENST00000423610 407 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AL591419.1-201ENST00000427423 339 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 RPS29P17-201ENST00000430795 166 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 RPS4XP13-201ENST00000483219 789 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 RPS29P20-201ENST00000489592 171 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 HMGB3P3-201ENST00000510526 400 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC055872.1-201ENST00000570978 278 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 MIR3923-201ENST00000579521 83 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 AC091932.3-201ENST00000624223 323 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 MIR3674-201ENST00000636576 68 ntBASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PHTF2Q8N3S3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AP000542.2-201ENST00000623199 6179 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RNU6-653P-201ENST00000363074 106 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RNU6-417P-201ENST00000384712 107 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RNA5SP372-201ENST00000390836 115 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 U3.26-201ENST00000391236 204 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 MIR208B-201ENST00000401172 77 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RN7SKP53-201ENST00000411337 315 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 BTF3P11-201ENST00000426582 477 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RN7SL303P-201ENST00000469773 251 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC022795.1-201ENST00000473808 480 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AL049830.2-201ENST00000480072 201 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RN7SL810P-201ENST00000493031 276 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC009127.3-201ENST00000570531 403 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 MIR3160-1-201ENST00000577972 85 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 MIR3690-201ENST00000580266 75 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 MIR3145-201ENST00000580727 82 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC092628.2-201ENST00000622492 339 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC091895.1-201ENST00000624494 256 ntBASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PHTF2Q8N3S3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms