Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS52Q8N1B4 MIR5692C1-201ENST00000585309 91 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AC002044.1-201ENST00000606707 158 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 AC104260.1-201ENST00000616660 539 ntBASIC3.14□□□□□ -1.91
VPS52Q8N1B4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS52Q8N1B4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS52Q8N1B4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RNU6-254P-201ENST00000363377 107 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 MTND3P8-201ENST00000412909 339 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 NUP35P1-201ENST00000422734 947 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AL353729.1-201ENST00000425044 720 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RPL21P2-201ENST00000440049 481 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RN7SL633P-201ENST00000488974 297 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RNU4-49P-201ENST00000516080 140 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RNU6-864P-201ENST00000516256 108 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS52Q8N1B4 MIR4742-201ENST00000581069 85 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 NUTF2P8-201ENST00000604593 363 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC009994.1-201ENST00000606889 253 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AL357078.3-201ENST00000607528 618 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 AC093913.1-201ENST00000614178 329 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 FAM157A-202ENST00000615155 405 ntBASIC3.13□□□□□ -1.91
VPS52Q8N1B4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC062016.1-201ENST00000355719 319 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 SNORA32.2-201ENST00000384049 122 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC007560.1-201ENST00000426912 237 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 RPL26P9-201ENST00000457466 433 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 MIR4782-201ENST00000577987 79 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AC005261.5-201ENST00000596280 355 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 AL121757.2-201ENST00000611223 313 ntBASIC3.12□□□□□ -1.91
VPS52Q8N1B4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS52Q8N1B4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.70-201ENST00000362886 110 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 SNORD81.2-201ENST00000365153 76 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 RNU6-658P-201ENST00000384606 106 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 MIR518D-201ENST00000385014 87 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC098831.1-201ENST00000440661 216 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC233279.1-201ENST00000455300 423 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC114781.4-201ENST00000513707 639 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 RNU6-507P-201ENST00000516045 100 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AP000889.2-201ENST00000532684 490 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC243972.3-201ENST00000539655 198 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AP000763.2-201ENST00000540641 163 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 NACAP3-201ENST00000552100 481 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 SCOCP1-201ENST00000554676 349 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 RPL23AP88-201ENST00000605759 454 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC116312.1-201ENST00000606841 314 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AL022345.1-201ENST00000607292 135 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 U6.99-201ENST00000637524 83 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS52Q8N1B4 MTND4P12-201ENST00000498999 1377 ntBASIC3.11□□□□□ -1.91
VPS52Q8N1B4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
VPS52Q8N1B4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms