Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.63□□□□□ -1.99
LDB1Q86U70 UBE2V1P8-201ENST00000437166 265 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 HMGB1P31-201ENST00000437242 427 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 FABP5P14-201ENST00000437273 393 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB1Q86U70 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 AIG1P1-201ENST00000503376 148 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MTND1P5-201ENST00000517906 940 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB1Q86U70 CYCSP27-201ENST00000527643 293 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB1Q86U70 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB1Q86U70 AC138761.3-201ENST00000579993 334 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MIR4765-201ENST00000585007 77 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 RPL23AP88-201ENST00000605759 454 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 OR4G1P-203ENST00000641984 1631 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LDB1Q86U70 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
LDB1Q86U70 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.63□□□□□ -1.99
LDB1Q86U70 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LDB1Q86U70 HAUS6P2-201ENST00000433254 2404 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LDB1Q86U70 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB1Q86U70 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB1Q86U70 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-37P-201ENST00000362692 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-11P-201ENST00000364234 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 Y_RNA.231-201ENST00000364358 102 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-1180P-201ENST00000364935 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 SET-203ENST00000372688 801 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-25P-201ENST00000383873 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-1-201ENST00000383898 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-48P-201ENST00000384161 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-36P-201ENST00000384172 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-4P-201ENST00000384205 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-5P-201ENST00000384238 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-3P-201ENST00000384314 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-16P-201ENST00000384385 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-843P-201ENST00000384454 104 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 SNORD116-20-201ENST00000384529 92 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-15P-201ENST00000384534 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-2-201ENST00000384627 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-29P-201ENST00000384637 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 Y_RNA.573-201ENST00000384763 105 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-9-201ENST00000384776 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-33P-201ENST00000384793 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AL360182.1-201ENST00000397433 468 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU2-52P-201ENST00000410680 190 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-1328P-201ENST00000410938 106 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 POLHP1-201ENST00000411806 470 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 OR9R1P-201ENST00000412200 877 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RPLP0P7-201ENST00000416050 667 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AL096701.2-201ENST00000416920 238 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 Z98742.2-201ENST00000431564 187 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 MICF-203ENST00000432679 129 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 AL121769.1-201ENST00000469473 401 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB1Q86U70 Y_RNA.654-201ENST00000497848 106 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-189P-201ENST00000516120 101 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-1038P-201ENST00000516516 104 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB1Q86U70 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AC023050.3-201ENST00000541142 333 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 VN1R80P-201ENST00000597126 338 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 NRBF2P5-201ENST00000603087 788 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 ATP1B3P1-201ENST00000605365 821 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 RNU6-6P-201ENST00000606623 107 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AL359198.2-201ENST00000611836 194 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LDB1Q86U70 AC103705.1-201ENST00000619013 241 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
LDB1Q86U70 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU6-78P-201ENST00000362897 107 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU6-451P-201ENST00000362921 107 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU6-461P-201ENST00000364195 107 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 Y_RNA.378-201ENST00000365652 113 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 RNU1-109P-201ENST00000383960 147 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LDB1Q86U70 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB1Q86U70 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 Y_RNA.619-201ENST00000410951 90 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 USP9YP20-201ENST00000419224 558 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 EIF1P1-201ENST00000421436 341 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 MTND1P4-201ENST00000435196 415 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.61□□□□□ -1.99
LDB1Q86U70 AP001486.1-201ENST00000463339 476 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 AL049873.1-201ENST00000480540 376 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.61□□□□□ -1.99
LDB1Q86U70 RPL22P13-201ENST00000493291 347 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 SNORA31.18-201ENST00000517043 134 ntBASIC2.61□□□□□ -1.99
LDB1Q86U70 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms