Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC074050.1-201ENST00000563247 211 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 MIR4744-201ENST00000581563 82 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 AC069294.1-201ENST00000608397 350 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 AC099669.2-201ENST00000616549 437 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 AL138721.1-201ENST00000616756 179 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 SNORA43.4-201ENST00000629559 138 ntBASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXR1Q6PIV2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AL353743.1-202ENST00000431724 1695 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 RNU6-199P-201ENST00000362954 107 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 RNU6-527P-201ENST00000363425 104 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 RNA5SP447-201ENST00000363749 119 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 SNORA72.2-201ENST00000365028 127 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 RNU6-1144P-201ENST00000384247 104 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 RNU6-72P-201ENST00000384285 79 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 Y_RNA.572-201ENST00000384757 98 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MIR888-201ENST00000401186 77 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AC092991.1-201ENST00000477176 376 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AC107027.2-201ENST00000512197 115 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AC021269.2-201ENST00000532318 330 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MIR1254-2-201ENST00000579553 63 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AL590392.1-201ENST00000604960 446 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 AC091932.3-201ENST00000624223 323 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MAPK10-286ENST00000641208 8747 ntBASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXR1Q6PIV2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 FAM35DP-201ENST00000323387 2712 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AC027290.2-201ENST00000623210 18662 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RNU1-15P-201ENST00000353977 144 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 Y_RNA.245-201ENST00000364493 95 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 U3.30-201ENST00000391308 210 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RPS12P23-201ENST00000419579 400 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RPL23AP58-201ENST00000440453 469 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AL078601.1-201ENST00000444542 271 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AL590399.6-201ENST00000446396 307 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AC026402.1-201ENST00000513642 170 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RNU6-589P-201ENST00000516485 107 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 AC004467.1-201ENST00000615678 330 ntBASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXR1Q6PIV2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 MIR1193-201ENST00000408109 78 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 PPIAP21-201ENST00000464473 501 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 RNU6-168P-201ENST00000516189 101 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 RNU6-155P-201ENST00000516347 100 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 RNU6-453P-201ENST00000516819 85 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 AC022726.1-201ENST00000587475 207 ntBASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXR1Q6PIV2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 SNORA36A-201ENST00000384221 132 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 U3.19-201ENST00000390893 196 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 EIF1AXP1-201ENST00000419267 435 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 RPL23AP1-201ENST00000428990 471 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms