Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL136380.1-201ENST00000447970 162 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL583843.1-201ENST00000456070 346 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 MTCO2P6-201ENST00000463134 685 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC068781.1-201ENST00000488231 618 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 CKS1BP2-201ENST00000497342 240 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC112206.3-201ENST00000514578 389 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 Vault.3-201ENST00000516676 95 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 RNU6-685P-201ENST00000517088 95 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL670379.10-201ENST00000604330 253 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL670379.9-201ENST00000605428 253 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 AL133173.2-201ENST00000614270 90 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AP001506.1-201ENST00000615444 211 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC009233.1-201ENST00000616477 371 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 AC093648.1-201ENST00000623546 606 ntBASIC2.06□□□□□ -2.08
ATL3Q6DD88 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.06□□□□□ -2.08
ATL3Q6DD88 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATL3Q6DD88 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATL3Q6DD88 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
ATL3Q6DD88 RNY4P34-201ENST00000364779 95 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 MIR578-201ENST00000384828 96 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 MIR95-201ENST00000385072 81 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 RNU6-195P-201ENST00000411352 109 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC009518.2-201ENST00000418056 731 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC073614.1-201ENST00000438690 650 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AL513124.1-201ENST00000450410 614 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC087883.1-201ENST00000551882 391 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ATL3Q6DD88 AL138889.2-201ENST00000603883 242 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 Z94722.1-201ENST00000604328 474 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AL355297.2-201ENST00000604792 129 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC091931.1-201ENST00000623488 728 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC019226.2-201ENST00000625973 424 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.05□□□□□ -2.08
ATL3Q6DD88 FARSBP1-201ENST00000435808 1778 ntBASIC2.05□□□□□ -2.08
ATL3Q6DD88 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 MIR412-201ENST00000362142 91 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 U3.4-201ENST00000363352 213 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 RNY1P12-201ENST00000364251 105 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 RNU6-384P-201ENST00000364900 104 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 RNU6-74P-201ENST00000384235 107 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 CISD1P1-201ENST00000393907 327 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 MIR1294-201ENST00000408503 142 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 EEF1A1P40-201ENST00000412883 573 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 CALM2P2-201ENST00000428512 440 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL627311.1-201ENST00000431514 115 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL161788.1-201ENST00000441805 169 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 RPS27AP8-201ENST00000452665 445 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 snoU109.1-201ENST00000459339 135 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC117522.2-201ENST00000510049 657 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 SMURF2P1-201ENST00000514992 481 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 MIR3682-201ENST00000581338 84 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 DEFB131E-202ENST00000602581 683 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL158032.1-201ENST00000605401 106 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC008250.2-201ENST00000615261 205 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC008121.3-201ENST00000618726 433 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ATL3Q6DD88 AL157786.1-207ENST00000627771 695 ntBASIC2.04□□□□□ -2.08
ATL3Q6DD88 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATL3Q6DD88 FGF7P2-201ENST00000332473 296 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 RNY3P10-201ENST00000384764 102 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.03□□□□□ -2.08
ATL3Q6DD88 ISCA1P6-201ENST00000427740 390 ntBASIC2.03□□□□□ -2.08
ATL3Q6DD88 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms