Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RN7SKP53-201ENST00000411337 315 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AC010154.1-201ENST00000425857 269 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AC009238.2-201ENST00000431026 355 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RPS20P10-201ENST00000451209 253 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AP001486.1-201ENST00000463339 476 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RPS27AP10-201ENST00000496103 208 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RNA5SP272-201ENST00000516095 111 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 SNORD116-25-201ENST00000516517 92 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 SUMO2P18-201ENST00000518873 252 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MIR3684-201ENST00000579779 74 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 AC006380.1-201ENST00000603598 186 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PRPF38BQ5VTL8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RNU6-324P-201ENST00000363957 106 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RNU4-84P-201ENST00000364200 139 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RNU6-818P-201ENST00000364837 108 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RNU2-54P-201ENST00000410299 190 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RPL26P9-201ENST00000457466 433 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 AC091179.3-201ENST00000474761 144 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 AC005840.1-201ENST00000498412 377 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 AC009127.3-201ENST00000570531 403 ntBASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.02□□□□□ -1.61
PRPF38BQ5VTL8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AC063976.2-201ENST00000425667 3556 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 Y_RNA.75-201ENST00000362927 97 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 Y_RNA.121-201ENST00000363309 113 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 RNA5SP130-201ENST00000364431 114 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 EI24P2-201ENST00000397776 1076 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 SDHCP2-201ENST00000398565 501 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AL160275.2-201ENST00000412010 394 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 ELOCP21-201ENST00000412558 336 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 RPL7AP49-201ENST00000429522 581 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AL591438.1-201ENST00000433508 581 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 VDAC1P3-201ENST00000434069 851 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 RPS29P20-201ENST00000489592 171 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AC078918.1-201ENST00000498515 228 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 Vault.1-201ENST00000516474 102 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 SNORA31.16-201ENST00000516773 139 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 Y_RNA.719-201ENST00000517156 106 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 TGIF1P1-201ENST00000558095 802 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AL162713.1-201ENST00000604480 262 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 MIR6715A-201ENST00000615929 79 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 Y_RNA.778-201ENST00000620203 90 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 MIR3674-201ENST00000636576 68 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 TLK1P1-201ENST00000456760 2440 ntBASIC5.01□□□□□ -1.61
PRPF38BQ5VTL8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 RNU6-245P-201ENST00000384020 107 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 MIR607-201ENST00000385241 96 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 RNA5SP390-201ENST00000410191 113 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 RNA5SP129-201ENST00000410276 118 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 RNU6-1199P-201ENST00000411249 104 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 AC099548.1-201ENST00000421443 426 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 AC090525.1-201ENST00000479116 478 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 Y_RNA.797-201ENST00000515977 94 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5□□□□□ -1.61
PRPF38BQ5VTL8 TRAV8-5-201ENST00000537369 341 ntBASIC5□□□□□ -1.61
PRPF38BQ5VTL8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms