Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 EIF1P2-201ENST00000428233 350 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AC005002.2-201ENST00000438228 269 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 RPS15AP7-201ENST00000439294 405 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AK6P2-201ENST00000549020 471 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 TRAV28-201ENST00000557548 323 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 AC011476.5-201ENST00000615594 130 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 MIR6715B-201ENST00000637172 77 ntBASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL13A1Q5TAT6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1286P-201ENST00000383871 107 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 AL353705.4-201ENST00000449661 238 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 AC022795.1-201ENST00000473808 480 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1114P-201ENST00000516022 107 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RNU2-27P-201ENST00000516185 142 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RNA5SP360-201ENST00000516555 118 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RNU6-861P-201ENST00000516745 106 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 RN7SKP272-201ENST00000516988 232 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 AC024153.1-201ENST00000603103 365 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL13A1Q5TAT6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 Y_RNA.292-201ENST00000364904 97 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 U1.1-201ENST00000384101 164 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RPS4XP3-201ENST00000398541 413 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 MIR887-201ENST00000401258 79 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 U3.37-201ENST00000408528 213 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 AL390729.2-201ENST00000416137 156 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 Z74021.1-201ENST00000423610 407 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 AC109925.1-201ENST00000478069 331 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RPL7P47-201ENST00000497299 556 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 HMGB1P22-201ENST00000505315 124 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 PHBP14-201ENST00000512887 367 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RNU6-1278P-201ENST00000516130 107 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 RNA5SP179-201ENST00000517284 121 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 AC016256.1-201ENST00000547971 354 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 MIR4782-201ENST00000577987 79 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.53□□□□□ -1.68
COL13A1Q5TAT6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AC118273.1-201ENST00000525324 3006 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNU6-222P-201ENST00000362438 107 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNU6-527P-201ENST00000363425 104 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNU6-879P-201ENST00000364328 108 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNA5SP97-201ENST00000365006 84 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNU6-318P-201ENST00000384283 103 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 Y_RNA.569-201ENST00000384749 103 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 MIR613-201ENST00000385248 95 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RPL19P1-201ENST00000411635 428 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AL513477.1-202ENST00000417061 214 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 SNRPEP9-201ENST00000436794 238 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 snoU109.2-201ENST00000459316 135 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RPL23AP49-201ENST00000492925 468 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 Y_RNA.662-201ENST00000516028 97 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AP004607.1-201ENST00000524456 203 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 CYCSP40-201ENST00000575927 294 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 MIR4423-201ENST00000580922 80 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 MIR5187-201ENST00000583479 76 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 SNRPGP15-201ENST00000600149 222 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AC091167.4-201ENST00000605079 184 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AL356157.2-201ENST00000605122 111 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 U6.106-201ENST00000636360 105 ntBASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL13A1Q5TAT6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms