Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 AC093023.1-201ENST00000547375 507 ntBASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 AC078938.1-201ENST00000620993 318 ntBASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNAP47Q5SQN1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SNAP47Q5SQN1 AP001148.1-201ENST00000624124 2359 ntBASIC4.09□□□□□ -1.76
SNAP47Q5SQN1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RNU6-212P-201ENST00000362642 104 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RNU6-1301P-201ENST00000362724 104 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RNU6-1141P-201ENST00000364520 107 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RNU6-843P-201ENST00000384454 104 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 Y_RNA.504-201ENST00000384481 104 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RPL21P65-201ENST00000406094 466 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 HAUS6P2-201ENST00000433254 2404 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 HLA-N-201ENST00000437516 135 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RPL39P38-201ENST00000467018 153 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 SNRPGP7-201ENST00000469016 106 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 MTND1P19-201ENST00000511780 315 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 ACA59.2-201ENST00000517061 156 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 HSPE1P4-201ENST00000550617 308 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 MIR5571-201ENST00000577998 113 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 MIR3128-201ENST00000581957 66 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.08□□□□□ -1.76
SNAP47Q5SQN1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 Y_RNA.60-201ENST00000362831 98 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 RNU6-1026P-201ENST00000384465 108 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 Y_RNA.552-201ENST00000384665 112 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MIR134-201ENST00000385258 73 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 SNORD78.2-201ENST00000391076 69 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MTHFD2P2-201ENST00000407725 247 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AL356095.1-201ENST00000417217 199 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC139712.2-201ENST00000424302 339 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 RPL23AP46-201ENST00000438548 490 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AP000870.1-201ENST00000472927 406 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC098869.1-201ENST00000481627 292 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 RPS26P15-201ENST00000488067 348 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 RNU5F-8P-201ENST00000515941 111 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 RNU6-1012P-201ENST00000516606 109 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC010201.1-201ENST00000605051 540 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 SDR42E1P4-201ENST00000620894 481 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AF117829.1-206ENST00000621883 3802 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MIR3199-2-201ENST00000636243 86 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC018555.1-201ENST00000567548 1980 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 MTND5P6-201ENST00000422338 1798 ntBASIC4.07□□□□□ -1.76
SNAP47Q5SQN1 AC002546.1-201ENST00000588041 2504 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNA5SP22-201ENST00000365393 109 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNU6-487P-201ENST00000365430 104 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNU1-139P-201ENST00000391307 165 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 UBA52P6-201ENST00000399822 382 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RN7SKP61-201ENST00000410642 295 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNU2-25P-201ENST00000411041 191 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RN7SKP167-201ENST00000411047 285 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 GPM6BP3-201ENST00000442797 145 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC012308.1-201ENST00000451232 178 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 SSXP4-201ENST00000451349 245 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC016632.1-201ENST00000503994 196 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC099522.1-202ENST00000514718 367 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNU6-1023P-201ENST00000516137 106 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC136932.1-201ENST00000574771 208 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 MIR4300-201ENST00000581016 96 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC073410.2-201ENST00000603240 332 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 Y_RNA.772-201ENST00000606692 102 ntBASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.06□□□□□ -1.76
SNAP47Q5SQN1 AC240442.1-201ENST00000616055 283 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms