Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC093591.1-201ENST00000491435 481 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RPL21P16-201ENST00000495531 483 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC090136.1-201ENST00000520009 240 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 RNU6-323P-201ENST00000521915 107 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 COX6CP5-201ENST00000527162 228 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 MIR5680-201ENST00000577577 84 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 MIR4765-201ENST00000585007 77 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC019159.1-201ENST00000605094 187 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AC096772.1-201ENST00000609146 564 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AL442067.2-201ENST00000614033 363 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 RBBP8P1-201ENST00000449447 1844 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
CCDC38Q502W7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC38Q502W7 Z82195.2-201ENST00000612348 18351 ntBASIC3.13□□□□□ -1.91
CCDC38Q502W7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC009161.1-201ENST00000417306 376 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC38Q502W7 Z98742.2-201ENST00000431564 187 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 MICF-203ENST00000432679 129 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC013470.1-201ENST00000453438 462 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC38Q502W7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC133134.1-201ENST00000466800 359 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 RPL23AP49-201ENST00000492925 468 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 RPL22P13-201ENST00000493291 347 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 SNORA31.23-201ENST00000517219 133 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AP000763.2-201ENST00000540641 163 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC103810.1-201ENST00000579873 453 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC012493.2-201ENST00000595083 291 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC006504.8-201ENST00000621046 635 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
CCDC38Q502W7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC38Q502W7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 RNU6-527P-201ENST00000363425 104 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 SNORD113-7-201ENST00000363762 77 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 SNORA38.1-201ENST00000364172 131 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AL133475.1-201ENST00000404414 305 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RNA5SP120-201ENST00000410900 112 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RPL19P1-201ENST00000411635 428 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 MTND1P2-201ENST00000430604 821 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AL591043.1-201ENST00000432461 424 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AL031274.1-201ENST00000450334 232 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC109925.1-201ENST00000478069 331 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RPL36AP48-201ENST00000485521 314 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AP001025.1-201ENST00000486139 332 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC069439.1-201ENST00000494739 167 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 TRBVA-201ENST00000498804 316 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 FAM206BP-201ENST00000510179 541 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RNA5SP112-201ENST00000515937 99 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RNU6-358P-201ENST00000516564 75 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 AF235103.2-201ENST00000525753 346 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC010186.2-204ENST00000537668 439 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 MIR3200-201ENST00000580767 85 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 RPS15AP11-201ENST00000594193 385 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC090617.10-201ENST00000624308 134 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 MIR7157-201ENST00000635801 60 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 AC100810.6-201ENST00000638068 285 ntBASIC3.11□□□□□ -1.91
CCDC38Q502W7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC38Q502W7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC38Q502W7 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC38Q502W7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC38Q502W7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 SNORD56.1-201ENST00000362913 68 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 RNU6-105P-201ENST00000363909 104 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 SNORA7.4-201ENST00000384249 137 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 RNU6-622P-201ENST00000384272 103 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 RNA5SP390-201ENST00000410191 113 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 AL117339.3-201ENST00000418733 162 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC38Q502W7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC38Q502W7 RN7SL504P-201ENST00000494496 287 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC38Q502W7 AC079598.5-201ENST00000547460 117 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 PSMA3P-201ENST00000555485 635 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 AC060780.3-201ENST00000589464 80 ntBASIC3.1□□□□□ -1.91
CCDC38Q502W7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC38Q502W7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms