Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 AP002884.2-201ENST00000471647 395 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 AC116655.1-201ENST00000508324 901 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 SNRPGP17-201ENST00000603780 214 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 MIR7851-201ENST00000610611 160 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 AC092608.2-201ENST00000624427 218 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 MIR3199-2-201ENST00000636243 86 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 ADAM3A-203ENST00000461344 2157 ntBASIC3.41□□□□□ -1.86
KHDC1Q4VXA5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 RNU6-1280P-201ENST00000365211 107 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 RNU6-1040P-201ENST00000383974 107 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 Z82205.1-201ENST00000428456 297 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC006946.1-201ENST00000429106 328 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC034236.1-201ENST00000469891 373 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 SLC25A15P5-201ENST00000508033 253 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 RNA5SP384-201ENST00000516615 116 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AP005902.1-201ENST00000521358 186 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC109446.1-201ENST00000566172 220 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 BNIP3P22-201ENST00000593399 556 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC020895.1-201ENST00000595362 272 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC024220.1-201ENST00000603675 484 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 MIR3976-201ENST00000606807 139 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 MIR8076-201ENST00000611401 83 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC011890.2-201ENST00000613393 294 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC090617.7-201ENST00000623952 126 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
KHDC1Q4VXA5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNU6-527P-201ENST00000363425 104 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNU6-105P-201ENST00000363909 104 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 SNORA41-201ENST00000384675 132 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNU6-331P-201ENST00000384724 107 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC023141.4-201ENST00000412031 328 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC124916.1-201ENST00000444020 547 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNU6-976P-201ENST00000516086 111 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 SCARNA15.1-201ENST00000516384 125 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 SNORA70.19-201ENST00000516717 90 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNU6-612P-201ENST00000516909 102 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AP003072.1-201ENST00000531740 145 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC006199.1-201ENST00000548728 219 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 SNRPGP18-201ENST00000553000 214 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC074050.1-201ENST00000563247 211 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 MIR4273-201ENST00000582824 84 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 MIR3171-201ENST00000584270 74 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC107294.3-201ENST00000609211 526 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 MIR7975-201ENST00000619350 68 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC012314.7-201ENST00000619693 93 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 PLCE1P1-201ENST00000622094 305 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 uc_338.22-201ENST00000622722 187 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AL049781.1-201ENST00000623195 3585 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC007256.1-201ENST00000392253 2765 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
KHDC1Q4VXA5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 Y_RNA.112-201ENST00000363250 102 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 RNA5SP50-201ENST00000363731 107 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 RNU1-33P-201ENST00000364249 162 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 Y_RNA.445-201ENST00000384168 102 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AL591034.2-201ENST00000402839 359 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 FTH1P15-201ENST00000406984 280 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms