Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL161798.1-201ENST00000604630 131 ntBASIC0.89□□□□□ -2.27
RFX7Q2KHR2 NDUFA8P1-201ENST00000605525 367 ntBASIC0.89□□□□□ -2.27
RFX7Q2KHR2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RFX7Q2KHR2 AC007742.2-201ENST00000618226 398 ntBASIC0.89□□□□□ -2.27
RFX7Q2KHR2 AL136313.1-201ENST00000624804 202 ntBASIC0.89□□□□□ -2.27
RFX7Q2KHR2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 CDR1-202ENST00000625883 1485 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 SNORD33-201ENST00000362761 85 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 UBE2V1P15-201ENST00000407776 448 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 USP9YP26-201ENST00000421008 661 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 USP9YP18-201ENST00000425912 695 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 USP9YP17-201ENST00000444617 696 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC093809.1-201ENST00000509155 340 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC112198.4-201ENST00000515450 351 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 CYCSP27-201ENST00000527643 293 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC122134.1-202ENST00000569111 1201 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AL022345.1-201ENST00000607292 135 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 AC138627.2-201ENST00000624202 601 ntBASIC0.88□□□□□ -2.27
RFX7Q2KHR2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RFX7Q2KHR2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 RNU2-42P-201ENST00000410697 113 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.87□□□□□ -2.27
RFX7Q2KHR2 BX664727.1-201ENST00000416024 466 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC020550.1-201ENST00000447385 163 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.87□□□□□ -2.27
RFX7Q2KHR2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.87□□□□□ -2.27
RFX7Q2KHR2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.87□□□□□ -2.27
RFX7Q2KHR2 RNU6-678P-201ENST00000516832 109 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 OR6C7P-201ENST00000547875 934 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC136932.1-201ENST00000574771 208 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 RPL30P11-203ENST00000598995 310 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 RNU6-91P-201ENST00000607774 107 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC010975.3-201ENST00000618727 978 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC253576.2-201ENST00000618815 580 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AL445264.1-201ENST00000621719 171 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.87□□□□□ -2.27
RFX7Q2KHR2 HAUS6P2-201ENST00000433254 2404 ntBASIC0.87□□□□□ -2.27
RFX7Q2KHR2 AC008163.1-202ENST00000636004 2889 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 OR4G2P-201ENST00000328113 903 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 SNORD114-23-201ENST00000363536 72 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 RNU6-512P-201ENST00000364438 103 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 SNORD65.1-201ENST00000390889 71 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 RNA5SP501-201ENST00000410990 112 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 COX7BP2-201ENST00000437976 242 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 PRPS1P1-201ENST00000445305 876 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 FABP5P15-201ENST00000453566 214 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC108729.1-201ENST00000487812 947 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 MTCYBP43-201ENST00000513621 740 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 RNU5B-3P-201ENST00000516601 115 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 RNU6-1183P-201ENST00000517054 60 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC093012.1-202ENST00000549403 582 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC005786.1-201ENST00000588553 154 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AL583856.2-201ENST00000606298 543 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 AC008759.3-201ENST00000613300 508 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
RFX7Q2KHR2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.86□□□□□ -2.27
RFX7Q2KHR2 SNORD114-19-201ENST00000363072 75 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 RNU6-271P-201ENST00000363858 105 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MIR597-201ENST00000384968 97 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 RNU6-952P-201ENST00000391164 108 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC138623.1-201ENST00000418060 216 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC027644.1-201ENST00000419595 298 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC104651.1-201ENST00000427559 735 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MTCO1P3-201ENST00000429327 192 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MTND2P20-201ENST00000440805 661 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MTND2P30-201ENST00000456663 382 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC026414.1-201ENST00000504046 698 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 HMGB1P28-201ENST00000507778 552 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 RNU6-583P-201ENST00000516012 92 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AP003034.1-201ENST00000534621 422 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.85□□□□□ -2.27
RFX7Q2KHR2 LINC00557-201ENST00000563184 1279 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC002400.1-201ENST00000569310 726 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MIR4782-201ENST00000577987 79 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
RFX7Q2KHR2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms