Protein–RNA interactions for Protein: Q16143

SNCB, Beta-synuclein, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCBQ16143 CBX3P9-201ENST00000402326 552 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 RN7SKP61-201ENST00000410642 295 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 AL669831.1-202ENST00000428504 417 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 AL365400.1-201ENST00000431854 640 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.83□□□□□ -2.28
SNCBQ16143 ELOCP30-201ENST00000447108 299 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 MTND2P30-201ENST00000456663 382 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 snoU13.14-201ENST00000459372 104 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 AC108729.3-201ENST00000513484 108 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.83□□□□□ -2.28
SNCBQ16143 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SNCBQ16143 AL731537.2-201ENST00000561565 951 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.83□□□□□ -2.28
SNCBQ16143 AC091895.1-201ENST00000624494 256 ntBASIC0.83□□□□□ -2.28
SNCBQ16143 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SNCBQ16143 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SNCBQ16143 RNU5B-1-201ENST00000363286 116 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 RNU6-160P-201ENST00000384591 107 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC138623.1-201ENST00000418060 216 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 PIGFP2-201ENST00000421400 651 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
SNCBQ16143 AC005094.1-201ENST00000440420 368 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 RNU6-1225P-201ENST00000516336 65 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.82□□□□□ -2.28
SNCBQ16143 MTCO3P15-201ENST00000526563 574 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.82□□□□□ -2.28
SNCBQ16143 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.82□□□□□ -2.28
SNCBQ16143 AC069545.1-201ENST00000605671 358 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.82□□□□□ -2.28
SNCBQ16143 AL021879.1-201ENST00000611756 288 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC023158.2-201ENST00000614876 543 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.82□□□□□ -2.28
SNCBQ16143 AP000676.3-201ENST00000623299 569 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC022513.1-201ENST00000624512 117 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 AC068205.3-201ENST00000636385 468 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 MIR3529-201ENST00000637713 78 ntBASIC0.82□□□□□ -2.28
SNCBQ16143 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-655P-201ENST00000362858 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNY1P10-201ENST00000363268 113 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-1210P-201ENST00000363775 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-744P-201ENST00000365557 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-354P-201ENST00000383862 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-207P-201ENST00000384137 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-1316P-201ENST00000384242 108 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-610P-201ENST00000384264 107 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-1065P-201ENST00000384513 106 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-14P-201ENST00000384630 106 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 MIR29B2-201ENST00000385055 81 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 MRPL35P1-201ENST00000404272 572 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 USP9YP33-201ENST00000412220 421 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 C8orf59P1-201ENST00000429930 303 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 AL078601.1-201ENST00000444542 271 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.81□□□□□ -2.28
SNCBQ16143 RPL39P36-201ENST00000490784 156 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 SNORA31.19-201ENST00000517079 126 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.81□□□□□ -2.28
SNCBQ16143 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.81□□□□□ -2.28
SNCBQ16143 MIR4498-201ENST00000577599 66 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 AL022345.2-201ENST00000606307 135 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 BX284668.6-201ENST00000606899 438 ntBASIC0.81□□□□□ -2.28
SNCBQ16143 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.81□□□□□ -2.28
SNCBQ16143 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.81□□□□□ -2.28
SNCBQ16143 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
SNCBQ16143 RNU6-622P-201ENST00000384272 103 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AP000275.1-201ENST00000411943 390 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.8□□□□□ -2.28
SNCBQ16143 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
SNCBQ16143 RPS15AP12-201ENST00000419498 388 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AL589872.1-201ENST00000426602 288 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 Z82205.1-201ENST00000428456 297 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 FTH1P12-201ENST00000432137 551 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.8□□□□□ -2.28
SNCBQ16143 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.8□□□□□ -2.28
SNCBQ16143 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.8□□□□□ -2.28
SNCBQ16143 AL096829.2-201ENST00000446582 742 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 RPS4XP11-201ENST00000446897 772 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 RPS27P1-201ENST00000450552 247 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 OR2AQ1P-201ENST00000451972 200 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 RPL30P6-201ENST00000475925 342 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC108078.2-201ENST00000510750 236 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.8□□□□□ -2.28
SNCBQ16143 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 VN1R83P-201ENST00000595685 445 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC008945.2-201ENST00000606056 604 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AL136313.1-201ENST00000624804 202 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 AC100821.1-201ENST00000523153 2479 ntBASIC0.8□□□□□ -2.28
SNCBQ16143 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SNCBQ16143 Y_RNA.255-201ENST00000364581 97 ntBASIC0.79□□□□□ -2.28
SNCBQ16143 RNU6-166P-201ENST00000384371 107 ntBASIC0.79□□□□□ -2.28
SNCBQ16143 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 280.2 ms