Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL079305.1-201ENST00000623159 3008 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SOX4Q06945 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX4Q06945 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX4Q06945 AC135776.4-201ENST00000624300 1904 ntBASIC4.25□□□□□ -1.73
SOX4Q06945 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SOX4Q06945 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SOX4Q06945 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 UBE2WP1-201ENST00000362030 340 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 RNA5SP124-201ENST00000362739 110 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 MIR554-201ENST00000384874 96 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 SNORA48.7-201ENST00000391302 135 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 MIR1290-201ENST00000408735 78 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX4Q06945 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 AC083863.1-201ENST00000438811 231 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX4Q06945 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX4Q06945 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX4Q06945 AC010285.1-201ENST00000470580 392 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 RPL26P26-201ENST00000480251 434 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AP001025.1-201ENST00000486139 332 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 RN7SL323P-201ENST00000494712 295 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AC091959.1-201ENST00000495857 238 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 SNORA27.4-201ENST00000516650 95 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 SCARNA14-201ENST00000516903 136 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX4Q06945 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX4Q06945 AC008749.1-201ENST00000597650 306 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 RNA5SP108-201ENST00000605921 117 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX4Q06945 AL773545.4-201ENST00000637262 310 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 U6.99-201ENST00000637524 83 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 AL513478.4-201ENST00000641636 310 ntBASIC4.24□□□□□ -1.73
SOX4Q06945 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX4Q06945 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX4Q06945 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SOX4Q06945 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX4Q06945 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX4Q06945 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX4Q06945 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX4Q06945 RNU6-626P-201ENST00000363354 107 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RNU6-741P-201ENST00000383889 107 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 Y_RNA.446-201ENST00000384178 104 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RNU6-1289P-201ENST00000384431 106 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RNA5SP44-201ENST00000410446 133 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RNU6-1135P-201ENST00000411083 103 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 EIF1AXP1-201ENST00000419267 435 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC096638.1-201ENST00000444678 216 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AL500522.2-201ENST00000448562 343 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC087477.1-201ENST00000465747 340 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX4Q06945 RPL31P13-201ENST00000484151 370 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AF186996.7-201ENST00000492781 209 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RPL23AP49-201ENST00000492925 468 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RNY3P16-201ENST00000516338 101 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 SNORA43.2-201ENST00000516652 128 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 RN7SKP49-201ENST00000516675 260 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX4Q06945 MIR3158-1-201ENST00000583596 81 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AP002826.1-201ENST00000608835 315 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AL121772.2-201ENST00000614331 297 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC005296.1-201ENST00000616145 209 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 AC006133.1-201ENST00000617106 264 ntBASIC4.23□□□□□ -1.73
SOX4Q06945 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX4Q06945 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX4Q06945 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SOX4Q06945 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX4Q06945 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX4Q06945 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SOX4Q06945 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX4Q06945 AL136964.1-201ENST00000622038 2990 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX4Q06945 MIR410-201ENST00000362222 80 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 AL359837.1-201ENST00000381357 287 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 U8.11-201ENST00000384699 133 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 U8.12-201ENST00000384701 133 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 RNU6-541P-201ENST00000384709 110 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 U3.39-201ENST00000408569 239 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 RNA5SP31-201ENST00000411144 127 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 AL031659.1-201ENST00000447075 539 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 SSXP4-201ENST00000451349 245 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 U8.18-201ENST00000459285 133 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 AC117440.1-201ENST00000474107 571 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX4Q06945 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX4Q06945 AC087499.8-201ENST00000578406 226 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 AC024153.1-201ENST00000603103 365 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 AC034229.5-201ENST00000624258 185 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SOX4Q06945 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX4Q06945 AL353743.1-202ENST00000431724 1695 ntBASIC4.22□□□□□ -1.73
SOX4Q06945 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms