Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.29□□□□□ -1.88
RHBDL3P58872 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.29□□□□□ -1.88
RHBDL3P58872 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.29□□□□□ -1.88
RHBDL3P58872 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDL3P58872 CYP2C59P-201ENST00000457790 269 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC090525.1-201ENST00000479116 478 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 RN7SL499P-201ENST00000481141 276 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 MTCYBP40-201ENST00000509390 1135 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC098799.2-201ENST00000509466 868 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 SMURF2P1-201ENST00000514992 481 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 RNU6-314P-201ENST00000516574 104 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 MIR5739-201ENST00000619803 80 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC010338.1-201ENST00000621823 717 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDL3P58872 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDL3P58872 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDL3P58872 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.28□□□□□ -1.88
RHBDL3P58872 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RHBDL3P58872 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 RNA5SP240-201ENST00000365355 128 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 AL356057.3-201ENST00000402607 340 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 SUMO1P4-201ENST00000429430 302 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.28□□□□□ -1.88
RHBDL3P58872 AC112220.1-201ENST00000434628 355 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 AC003982.1-202ENST00000469928 248 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 CKS1BP2-201ENST00000497342 240 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 RNU6-1281P-201ENST00000516223 105 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 SNORD60.2-201ENST00000516883 86 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 RNU6-835P-201ENST00000516974 104 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 SNORA25.17-201ENST00000517184 124 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 AC022880.1-201ENST00000534017 973 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 AL157687.1-201ENST00000554853 619 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.28□□□□□ -1.88
RHBDL3P58872 AC090897.2-201ENST00000581715 130 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 AC139792.2-201ENST00000624218 587 ntBASIC3.28□□□□□ -1.88
RHBDL3P58872 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RHBDL3P58872 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDL3P58872 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU4-82P-201ENST00000362443 140 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-37P-201ENST00000362692 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-859P-201ENST00000362728 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-11P-201ENST00000364234 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-25P-201ENST00000383873 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-1-201ENST00000383898 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-48P-201ENST00000384161 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-36P-201ENST00000384172 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-4P-201ENST00000384205 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-5P-201ENST00000384238 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-622P-201ENST00000384272 103 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-3P-201ENST00000384314 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-16P-201ENST00000384385 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-15P-201ENST00000384534 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-2-201ENST00000384627 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-29P-201ENST00000384637 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-9-201ENST00000384776 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-33P-201ENST00000384793 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RHBDL3P58872 RPLP0P7-201ENST00000416050 667 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDL3P58872 AL121601.2-201ENST00000438019 707 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.27□□□□□ -1.89
RHBDL3P58872 RPS3P1-201ENST00000456781 192 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 RPL23AP45-201ENST00000476406 468 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDL3P58872 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDL3P58872 HPRT1P3-201ENST00000539521 576 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.27□□□□□ -1.89
RHBDL3P58872 RNU6-6P-201ENST00000606623 107 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 AC002044.1-201ENST00000606707 158 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 AC004492.1-201ENST00000607036 742 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 uc_338.15-201ENST00000615470 191 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDL3P58872 AC243829.7-201ENST00000633081 225 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RHBDL3P58872 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RHBDL3P58872 AC002543.1-201ENST00000299783 1954 ntBASIC3.27□□□□□ -1.89
RHBDL3P58872 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RHBDL3P58872 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RHBDL3P58872 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RHBDL3P58872 SNORD56.1-201ENST00000362913 68 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 VTRNA1-1-201ENST00000363120 99 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 RNU6-1106P-201ENST00000390845 107 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.26□□□□□ -1.89
RHBDL3P58872 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.26□□□□□ -1.89
RHBDL3P58872 EIF4EP4-201ENST00000424916 578 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 ARL5AP4-201ENST00000430731 512 ntBASIC3.26□□□□□ -1.89
RHBDL3P58872 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms