Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN18P56856 CALM1P1-201ENST00000442082 433 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 AP000797.1-201ENST00000478870 387 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.58□□□□□ -2.16
CLDN18P56856 AC112206.3-201ENST00000514578 389 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.58□□□□□ -2.16
CLDN18P56856 RNU6-237P-201ENST00000515985 71 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 HSBP1P1-201ENST00000555205 166 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN18P56856 MIR548AC-201ENST00000585049 88 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 AL022154.1-201ENST00000604698 785 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 AC006927.4-201ENST00000639187 543 ntBASIC1.58□□□□□ -2.16
CLDN18P56856 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN18P56856 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN18P56856 OR4G2P-201ENST00000328113 903 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 snoU2_19.1-201ENST00000362361 80 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MIR29B2-201ENST00000385055 81 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 CBX3P9-201ENST00000402326 552 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 RNU2-23P-201ENST00000410545 195 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 RPS27AP14-201ENST00000422868 454 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 AL645568.3-201ENST00000433683 316 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
CLDN18P56856 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.57□□□□□ -2.16
CLDN18P56856 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.57□□□□□ -2.16
CLDN18P56856 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
CLDN18P56856 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.57□□□□□ -2.16
CLDN18P56856 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 AP003122.4-201ENST00000530980 758 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MIR3118-1-201ENST00000581787 76 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MTCO2P2-201ENST00000591258 225 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 AL138889.2-201ENST00000603883 242 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 AC092106.3-201ENST00000611308 722 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.57□□□□□ -2.16
CLDN18P56856 AL031667.3-201ENST00000620124 655 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 SCARNA4-202ENST00000625402 129 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN18P56856 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
CLDN18P56856 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLDN18P56856 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 RNA5SP99-201ENST00000364020 114 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLDN18P56856 RNU6-622P-201ENST00000384272 103 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLDN18P56856 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AL033519.2-201ENST00000403958 392 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 RNA5SP390-201ENST00000410191 113 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 RNU2-48P-201ENST00000410694 191 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 OR9R1P-201ENST00000412200 877 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 PGBD4P6-201ENST00000421501 610 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 EIF4EP2-201ENST00000422816 654 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.56□□□□□ -2.16
CLDN18P56856 UBE2V1P4-201ENST00000425374 344 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AC137499.1-201ENST00000427602 88 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 MTND1P32-201ENST00000433043 938 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 MTCO3P5-201ENST00000433620 714 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.56□□□□□ -2.16
CLDN18P56856 GDI2P2-201ENST00000445131 608 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 MTND1P12-201ENST00000455231 147 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 RPL30P12-201ENST00000474666 353 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AC117532.1-201ENST00000514638 323 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 Y_RNA.687-201ENST00000516558 91 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.56□□□□□ -2.16
CLDN18P56856 AL139022.2-201ENST00000606934 443 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 AL353997.5-201ENST00000618886 171 ntBASIC1.56□□□□□ -2.16
CLDN18P56856 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLDN18P56856 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
CLDN18P56856 RNU1-58P-201ENST00000362413 163 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 SNORD56.1-201ENST00000362913 68 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RNU6-944P-201ENST00000364023 107 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RNU6-660P-201ENST00000364566 109 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 CISD1P1-201ENST00000393907 327 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RNA5SP501-201ENST00000410990 112 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RNA5SP111-201ENST00000411386 101 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RPS20P15-201ENST00000412792 311 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 SRIP3-201ENST00000413200 219 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC074117.2-201ENST00000417130 397 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AL590556.1-201ENST00000423231 483 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN18P56856 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN18P56856 HMGB1P31-201ENST00000437242 427 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC118469.1-201ENST00000442943 488 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms