Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.128-201ENST00000363391 112 ntBASIC3.28□□□□□ -1.88
COPB1P53618 U3.26-201ENST00000391236 204 ntBASIC3.28□□□□□ -1.88
COPB1P53618 SNORA40C-201ENST00000391285 128 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AL590004.1-201ENST00000405321 300 ntBASIC3.28□□□□□ -1.88
COPB1P53618 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
COPB1P53618 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COPB1P53618 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.28□□□□□ -1.88
COPB1P53618 UBE2V1P4-201ENST00000425374 344 ntBASIC3.28□□□□□ -1.88
COPB1P53618 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.28□□□□□ -1.88
COPB1P53618 MTCO3P10-201ENST00000455912 772 ntBASIC3.28□□□□□ -1.88
COPB1P53618 RPL30P5-201ENST00000494923 336 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC116337.1-201ENST00000509680 687 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC096745.1-201ENST00000509945 370 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC026782.1-201ENST00000512952 449 ntBASIC3.28□□□□□ -1.88
COPB1P53618 RNU6-1016P-201ENST00000516689 94 ntBASIC3.28□□□□□ -1.88
COPB1P53618 RNA5SP165-201ENST00000517142 115 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC025755.1-201ENST00000521306 278 ntBASIC3.28□□□□□ -1.88
COPB1P53618 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.28□□□□□ -1.88
COPB1P53618 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.28□□□□□ -1.88
COPB1P53618 SNRPGP17-201ENST00000603780 214 ntBASIC3.28□□□□□ -1.88
COPB1P53618 NUTF2P8-201ENST00000604593 363 ntBASIC3.28□□□□□ -1.88
COPB1P53618 ELOCP5-201ENST00000604924 333 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC004805.2-201ENST00000605382 482 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC080078.3-201ENST00000605407 463 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AL110115.1-201ENST00000614396 364 ntBASIC3.28□□□□□ -1.88
COPB1P53618 MIR6128-201ENST00000615528 109 ntBASIC3.28□□□□□ -1.88
COPB1P53618 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
COPB1P53618 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.28□□□□□ -1.88
COPB1P53618 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
COPB1P53618 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
COPB1P53618 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.28□□□□□ -1.88
COPB1P53618 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.89
COPB1P53618 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
COPB1P53618 AL049641.1-201ENST00000441055 1948 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNU6-50P-201ENST00000362356 103 ntBASIC3.27□□□□□ -1.89
COPB1P53618 SNORD62.1-201ENST00000362541 86 ntBASIC3.27□□□□□ -1.89
COPB1P53618 SNORD14B-201ENST00000364533 90 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNU6-310P-201ENST00000384655 107 ntBASIC3.27□□□□□ -1.89
COPB1P53618 MIR325-201ENST00000385260 98 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNU4-47P-201ENST00000410876 114 ntBASIC3.27□□□□□ -1.89
COPB1P53618 BMS1P22-201ENST00000414726 313 ntBASIC3.27□□□□□ -1.89
COPB1P53618 YPEL5P1-201ENST00000419731 367 ntBASIC3.27□□□□□ -1.89
COPB1P53618 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.27□□□□□ -1.89
COPB1P53618 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
COPB1P53618 AC093303.1-201ENST00000514549 295 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNU1-103P-201ENST00000516502 125 ntBASIC3.27□□□□□ -1.89
COPB1P53618 RNU6-1282P-201ENST00000516735 96 ntBASIC3.27□□□□□ -1.89
COPB1P53618 ELOCP31-201ENST00000540463 467 ntBASIC3.27□□□□□ -1.89
COPB1P53618 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
COPB1P53618 MIR3171-201ENST00000584270 74 ntBASIC3.27□□□□□ -1.89
COPB1P53618 AC123912.5-201ENST00000605470 343 ntBASIC3.27□□□□□ -1.89
COPB1P53618 ATP5A1P2-202ENST00000616464 443 ntBASIC3.27□□□□□ -1.89
COPB1P53618 AC002546.1-201ENST00000588041 2504 ntBASIC3.27□□□□□ -1.89
COPB1P53618 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.27□□□□□ -1.89
COPB1P53618 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
COPB1P53618 KPNA2P1-201ENST00000458289 1591 ntBASIC3.26□□□□□ -1.89
COPB1P53618 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
COPB1P53618 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
COPB1P53618 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
COPB1P53618 SNORD73A-201ENST00000386062 65 ntBASIC3.26□□□□□ -1.89
COPB1P53618 SNORA48.5-201ENST00000391143 135 ntBASIC3.26□□□□□ -1.89
COPB1P53618 MIR548P-201ENST00000408336 84 ntBASIC3.26□□□□□ -1.89
COPB1P53618 RNU2-68P-201ENST00000410878 191 ntBASIC3.26□□□□□ -1.89
COPB1P53618 Y_RNA.646-201ENST00000410980 101 ntBASIC3.26□□□□□ -1.89
COPB1P53618 Y_RNA.623-201ENST00000411128 95 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
COPB1P53618 AL451074.5-201ENST00000415894 435 ntBASIC3.26□□□□□ -1.89
COPB1P53618 Z82205.1-201ENST00000428456 297 ntBASIC3.26□□□□□ -1.89
COPB1P53618 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.26□□□□□ -1.89
COPB1P53618 SNRPEP9-201ENST00000436794 238 ntBASIC3.26□□□□□ -1.89
COPB1P53618 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.26□□□□□ -1.89
COPB1P53618 BRK1P2-201ENST00000442875 223 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AL583843.1-201ENST00000456070 346 ntBASIC3.26□□□□□ -1.89
COPB1P53618 HMGN2P16-201ENST00000456802 261 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.26□□□□□ -1.89
COPB1P53618 Y_RNA.653-201ENST00000459091 95 ntBASIC3.26□□□□□ -1.89
COPB1P53618 RPS23P3-201ENST00000470993 430 ntBASIC3.26□□□□□ -1.89
COPB1P53618 MTCYBP40-201ENST00000509390 1135 ntBASIC3.26□□□□□ -1.89
COPB1P53618 RNU6-1213P-201ENST00000517075 94 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.26□□□□□ -1.89
COPB1P53618 SYF2P1-201ENST00000550658 413 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
COPB1P53618 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
COPB1P53618 AC012493.2-201ENST00000595083 291 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AC018462.2-201ENST00000605375 395 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AP000654.2-201ENST00000605633 586 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AL161423.1-201ENST00000613700 262 ntBASIC3.26□□□□□ -1.89
COPB1P53618 AL669831.3-213ENST00000636676 183 ntBASIC3.26□□□□□ -1.89
COPB1P53618 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COPB1P53618 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
COPB1P53618 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COPB1P53618 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
COPB1P53618 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COPB1P53618 FTLP6-201ENST00000355274 422 ntBASIC3.25□□□□□ -1.89
COPB1P53618 Y_RNA.146-201ENST00000363549 102 ntBASIC3.25□□□□□ -1.89
COPB1P53618 Y_RNA.197-201ENST00000364004 102 ntBASIC3.25□□□□□ -1.89
COPB1P53618 RNU6-217P-201ENST00000384164 104 ntBASIC3.25□□□□□ -1.89
COPB1P53618 RNU6-166P-201ENST00000384371 107 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms