Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004520.1-201ENST00000608362 1413 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC103988.1-201ENST00000566382 2177 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
PDX1P52945 RNU1-100P-201ENST00000365255 165 ntBASIC2.6□□□□□ -1.99
PDX1P52945 RNU6-877P-201ENST00000383868 107 ntBASIC2.6□□□□□ -1.99
PDX1P52945 RNU6-72P-201ENST00000384285 79 ntBASIC2.6□□□□□ -1.99
PDX1P52945 RNU6-750P-201ENST00000390946 107 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 RNA5SP508-201ENST00000411327 119 ntBASIC2.6□□□□□ -1.99
PDX1P52945 SNRPEP10-201ENST00000420249 274 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AL139415.2-201ENST00000431968 163 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 RPL21P2-201ENST00000440049 481 ntBASIC2.6□□□□□ -1.99
PDX1P52945 CALM1P1-201ENST00000442082 433 ntBASIC2.6□□□□□ -1.99
PDX1P52945 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.6□□□□□ -1.99
PDX1P52945 AC117503.1-201ENST00000472241 394 ntBASIC2.6□□□□□ -1.99
PDX1P52945 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.6□□□□□ -1.99
PDX1P52945 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.6□□□□□ -1.99
PDX1P52945 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
PDX1P52945 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.6□□□□□ -1.99
PDX1P52945 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 LINC00933-203ENST00000559812 219 ntBASIC2.6□□□□□ -1.99
PDX1P52945 SNORA59B-202ENST00000578183 701 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC020895.1-201ENST00000595362 272 ntBASIC2.6□□□□□ -1.99
PDX1P52945 BNIP3P25-201ENST00000596023 559 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AL355877.2-201ENST00000603670 358 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC005046.1-201ENST00000608515 625 ntBASIC2.6□□□□□ -1.99
PDX1P52945 U2.17-201ENST00000611454 95 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
PDX1P52945 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.6□□□□□ -1.99
PDX1P52945 UCA1.1-201ENST00000620952 75 ntBASIC2.6□□□□□ -1.99
PDX1P52945 MIR3199-2-201ENST00000636243 86 ntBASIC2.6□□□□□ -1.99
PDX1P52945 AC010889.1-201ENST00000566193 2666 ntBASIC2.6□□□□□ -1.99
PDX1P52945 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDX1P52945 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PDX1P52945 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDX1P52945 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDX1P52945 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDX1P52945 RNA5SP432-201ENST00000362480 116 ntBASIC2.59□□□□□ -1.99
PDX1P52945 RNU1-105P-201ENST00000363470 161 ntBASIC2.59□□□□□ -1.99
PDX1P52945 RNA5SP139-201ENST00000364340 117 ntBASIC2.59□□□□□ -1.99
PDX1P52945 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PDX1P52945 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.59□□□□□ -1.99
PDX1P52945 Y_RNA.615-201ENST00000410769 117 ntBASIC2.59□□□□□ -1.99
PDX1P52945 POLHP1-201ENST00000411806 470 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
PDX1P52945 RPLP0P7-201ENST00000416050 667 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC009963.1-201ENST00000417265 157 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.59□□□□□ -1.99
PDX1P52945 SRIP2-201ENST00000428470 166 ntBASIC2.59□□□□□ -1.99
PDX1P52945 MRPS10P2-201ENST00000431226 381 ntBASIC2.59□□□□□ -1.99
PDX1P52945 ERLEC1P1-201ENST00000433806 578 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AL121890.1-201ENST00000435457 205 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AL161651.1-201ENST00000440882 223 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC009296.1-201ENST00000443146 155 ntBASIC2.59□□□□□ -1.99
PDX1P52945 RNU6-1208P-201ENST00000459588 107 ntBASIC2.59□□□□□ -1.99
PDX1P52945 TRBV12-1-201ENST00000479785 344 ntBASIC2.59□□□□□ -1.99
PDX1P52945 Y_RNA.654-201ENST00000497848 106 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AF213884.2-201ENST00000510417 903 ntBASIC2.59□□□□□ -1.99
PDX1P52945 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.59□□□□□ -1.99
PDX1P52945 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.59□□□□□ -1.99
PDX1P52945 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.59□□□□□ -1.99
PDX1P52945 AC027176.1-201ENST00000560204 514 ntBASIC2.59□□□□□ -1.99
PDX1P52945 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
PDX1P52945 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
PDX1P52945 AC092608.2-201ENST00000624427 218 ntBASIC2.59□□□□□ -1.99
PDX1P52945 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDX1P52945 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PDX1P52945 Y_RNA.324-201ENST00000365165 102 ntBASIC2.58□□□□□ -2
PDX1P52945 RNA5SP354-201ENST00000391247 136 ntBASIC2.58□□□□□ -2
PDX1P52945 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDX1P52945 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
PDX1P52945 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
PDX1P52945 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.58□□□□□ -2
PDX1P52945 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.58□□□□□ -2
PDX1P52945 USP9YP28-201ENST00000435142 589 ntBASIC2.58□□□□□ -2
PDX1P52945 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.58□□□□□ -2
PDX1P52945 AC107626.1-201ENST00000471084 183 ntBASIC2.58□□□□□ -2
PDX1P52945 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.58□□□□□ -2
PDX1P52945 RNU6-189P-201ENST00000516120 101 ntBASIC2.58□□□□□ -2
PDX1P52945 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
PDX1P52945 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
PDX1P52945 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.58□□□□□ -2
PDX1P52945 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
PDX1P52945 RPL7P20-201ENST00000520308 745 ntBASIC2.58□□□□□ -2
PDX1P52945 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.58□□□□□ -2
PDX1P52945 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.58□□□□□ -2
PDX1P52945 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
PDX1P52945 AC087045.1-201ENST00000605856 382 ntBASIC2.58□□□□□ -2
PDX1P52945 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.58□□□□□ -2
PDX1P52945 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.58□□□□□ -2
PDX1P52945 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PDX1P52945 MIR26A1-201ENST00000362205 77 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms