Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 Y_RNA.681-201ENST00000516445 113 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 DEFB108D-201ENST00000527787 222 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AP005435.4-201ENST00000529514 284 ntBASIC2.25□□□□□ -2.05
ATRXP46100 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 SETP7-201ENST00000552169 453 ntBASIC2.25□□□□□ -2.05
ATRXP46100 MIR4795-201ENST00000584182 89 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC073539.2-201ENST00000597113 165 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC002064.3-201ENST00000623448 346 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC138627.2-201ENST00000624202 601 ntBASIC2.25□□□□□ -2.05
ATRXP46100 U6.114-201ENST00000636407 96 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC000123.3-201ENST00000624029 4975 ntBASIC2.25□□□□□ -2.05
ATRXP46100 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATRXP46100 Z82209.1-201ENST00000422141 2135 ntBASIC2.25□□□□□ -2.05
ATRXP46100 RNU6-1155P-201ENST00000363554 107 ntBASIC2.25□□□□□ -2.05
ATRXP46100 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATRXP46100 RNU6-641P-201ENST00000384006 107 ntBASIC2.25□□□□□ -2.05
ATRXP46100 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
ATRXP46100 OR9R1P-201ENST00000412200 877 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC074085.1-201ENST00000413598 418 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.25□□□□□ -2.05
ATRXP46100 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.25□□□□□ -2.05
ATRXP46100 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 AL137159.1-201ENST00000452808 512 ntBASIC2.25□□□□□ -2.05
ATRXP46100 RPL31P41-201ENST00000477967 372 ntBASIC2.25□□□□□ -2.05
ATRXP46100 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.25□□□□□ -2.05
ATRXP46100 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.25□□□□□ -2.05
ATRXP46100 CKS1BP7-201ENST00000522230 235 ntBASIC2.25□□□□□ -2.05
ATRXP46100 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ATRXP46100 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 HIF1AP1-201ENST00000553642 175 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.25□□□□□ -2.05
ATRXP46100 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
ATRXP46100 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.25□□□□□ -2.05
ATRXP46100 MTND5P10-201ENST00000603719 1809 ntBASIC2.25□□□□□ -2.05
ATRXP46100 Y_RNA.67-201ENST00000362870 100 ntBASIC2.24□□□□□ -2.05
ATRXP46100 SNORD81.2-201ENST00000365153 76 ntBASIC2.24□□□□□ -2.05
ATRXP46100 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATRXP46100 Y_RNA.404-201ENST00000383978 102 ntBASIC2.24□□□□□ -2.05
ATRXP46100 SNORA46-201ENST00000384762 135 ntBASIC2.24□□□□□ -2.05
ATRXP46100 RN7SKP266-201ENST00000410232 287 ntBASIC2.24□□□□□ -2.05
ATRXP46100 ATG3P1-201ENST00000419507 911 ntBASIC2.24□□□□□ -2.05
ATRXP46100 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.24□□□□□ -2.05
ATRXP46100 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.24□□□□□ -2.05
ATRXP46100 AC092451.1-201ENST00000480211 153 ntBASIC2.24□□□□□ -2.05
ATRXP46100 RPL38P4-201ENST00000502376 214 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
ATRXP46100 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.24□□□□□ -2.05
ATRXP46100 RNA5SP384-201ENST00000516615 116 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.24□□□□□ -2.05
ATRXP46100 AC131238.1-201ENST00000617135 328 ntBASIC2.24□□□□□ -2.05
ATRXP46100 MTND4P1-201ENST00000457501 1466 ntBASIC2.24□□□□□ -2.05
ATRXP46100 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
ATRXP46100 MTND5P17-201ENST00000418405 1603 ntBASIC2.24□□□□□ -2.05
ATRXP46100 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.24□□□□□ -2.05
ATRXP46100 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ATRXP46100 Y_RNA.80-201ENST00000362996 102 ntBASIC2.24□□□□□ -2.05
ATRXP46100 RNU6-116P-201ENST00000384042 109 ntBASIC2.24□□□□□ -2.05
ATRXP46100 Y_RNA.485-201ENST00000384395 102 ntBASIC2.24□□□□□ -2.05
ATRXP46100 RNU6-393P-201ENST00000384475 107 ntBASIC2.24□□□□□ -2.05
ATRXP46100 Y_RNA.509-201ENST00000384506 99 ntBASIC2.24□□□□□ -2.05
ATRXP46100 MIR124-3-201ENST00000384866 87 ntBASIC2.24□□□□□ -2.05
ATRXP46100 SNORA40C-201ENST00000391285 128 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
ATRXP46100 USP9YP20-201ENST00000419224 558 ntBASIC2.24□□□□□ -2.05
ATRXP46100 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.24□□□□□ -2.05
ATRXP46100 RNU7-180P-201ENST00000459240 63 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AC087588.1-201ENST00000462203 316 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.24□□□□□ -2.05
ATRXP46100 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ATRXP46100 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.24□□□□□ -2.05
ATRXP46100 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.24□□□□□ -2.05
ATRXP46100 MIR3921-201ENST00000577308 85 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.24□□□□□ -2.05
ATRXP46100 AC011712.1-201ENST00000588959 234 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AL133215.3-201ENST00000609801 448 ntBASIC2.24□□□□□ -2.05
ATRXP46100 AL365204.3-201ENST00000612448 685 ntBASIC2.24□□□□□ -2.05
ATRXP46100 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.24□□□□□ -2.05
ATRXP46100 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
ATRXP46100 RNU6-37P-201ENST00000362692 107 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RNU6-97P-201ENST00000363387 104 ntBASIC2.23□□□□□ -2.05
ATRXP46100 Y_RNA.160-201ENST00000363677 92 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RNU6-1284P-201ENST00000363701 100 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RNU6-11P-201ENST00000364234 107 ntBASIC2.23□□□□□ -2.05
ATRXP46100 MIR578-201ENST00000384828 96 ntBASIC2.23□□□□□ -2.05
ATRXP46100 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ATRXP46100 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.23□□□□□ -2.05
ATRXP46100 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
ATRXP46100 RNA5SP274-201ENST00000410484 108 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.23□□□□□ -2.05
ATRXP46100 UBE2FP1-201ENST00000416536 447 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.23□□□□□ -2.05
ATRXP46100 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.23□□□□□ -2.05
ATRXP46100 AL356010.1-201ENST00000456364 102 ntBASIC2.23□□□□□ -2.05
ATRXP46100 Y_RNA.635-201ENST00000459041 101 ntBASIC2.23□□□□□ -2.05
ATRXP46100 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.23□□□□□ -2.05
ATRXP46100 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms