Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HSFY5P-201ENST00000453726 309 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.63□□□□□ -2.15
RFC3P40938 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.63□□□□□ -2.15
RFC3P40938 AC091965.2-201ENST00000512324 613 ntBASIC1.63□□□□□ -2.15
RFC3P40938 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.63□□□□□ -2.15
RFC3P40938 CYCSP27-201ENST00000527643 293 ntBASIC1.63□□□□□ -2.15
RFC3P40938 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.63□□□□□ -2.15
RFC3P40938 OR5AL2P-201ENST00000532185 920 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AP000763.2-201ENST00000540641 163 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.63□□□□□ -2.15
RFC3P40938 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.63□□□□□ -2.15
RFC3P40938 AL359314.1-201ENST00000616913 261 ntBASIC1.63□□□□□ -2.15
RFC3P40938 AC103710.2-202ENST00000641454 2853 ntBASIC1.62□□□□□ -2.15
RFC3P40938 RNU6-533P-201ENST00000384144 107 ntBASIC1.62□□□□□ -2.15
RFC3P40938 RNU6-611P-201ENST00000384276 104 ntBASIC1.62□□□□□ -2.15
RFC3P40938 MIR1294-201ENST00000408503 142 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
RFC3P40938 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.62□□□□□ -2.15
RFC3P40938 AL645568.3-201ENST00000433683 316 ntBASIC1.62□□□□□ -2.15
RFC3P40938 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.62□□□□□ -2.15
RFC3P40938 AL354941.1-201ENST00000438600 464 ntBASIC1.62□□□□□ -2.15
RFC3P40938 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
RFC3P40938 snoU109.2-201ENST00000459316 135 ntBASIC1.62□□□□□ -2.15
RFC3P40938 MTCO2P29-201ENST00000465212 189 ntBASIC1.62□□□□□ -2.15
RFC3P40938 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.62□□□□□ -2.15
RFC3P40938 AP001025.1-201ENST00000486139 332 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AC020699.1-201ENST00000505161 445 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.62□□□□□ -2.15
RFC3P40938 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.62□□□□□ -2.15
RFC3P40938 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.62□□□□□ -2.15
RFC3P40938 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.62□□□□□ -2.15
RFC3P40938 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.62□□□□□ -2.15
RFC3P40938 AL354943.1-201ENST00000572103 781 ntBASIC1.62□□□□□ -2.15
RFC3P40938 AL078605.1-201ENST00000603529 500 ntBASIC1.62□□□□□ -2.15
RFC3P40938 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
RFC3P40938 AC104010.1-201ENST00000616889 150 ntBASIC1.62□□□□□ -2.15
RFC3P40938 U6.42-201ENST00000618440 107 ntBASIC1.62□□□□□ -2.15
RFC3P40938 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RFC3P40938 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.62□□□□□ -2.15
RFC3P40938 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RFC3P40938 RNU6-655P-201ENST00000362858 107 ntBASIC1.61□□□□□ -2.15
RFC3P40938 RNU4-1-201ENST00000363925 141 ntBASIC1.61□□□□□ -2.15
RFC3P40938 RNU6-1274P-201ENST00000384557 107 ntBASIC1.61□□□□□ -2.15
RFC3P40938 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
RFC3P40938 MIR10A-201ENST00000385043 110 ntBASIC1.61□□□□□ -2.15
RFC3P40938 MIR29C-201ENST00000385231 88 ntBASIC1.61□□□□□ -2.15
RFC3P40938 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RFC3P40938 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RFC3P40938 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.61□□□□□ -2.15
RFC3P40938 AC137499.1-201ENST00000427602 88 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AC108667.1-201ENST00000428618 249 ntBASIC1.61□□□□□ -2.15
RFC3P40938 CALM1P1-201ENST00000442082 433 ntBASIC1.61□□□□□ -2.15
RFC3P40938 USP9YP15-201ENST00000442391 422 ntBASIC1.61□□□□□ -2.15
RFC3P40938 RN7SKP210-201ENST00000459176 261 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
RFC3P40938 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.61□□□□□ -2.15
RFC3P40938 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.61□□□□□ -2.15
RFC3P40938 ADI1P3-201ENST00000549509 470 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.61□□□□□ -2.15
RFC3P40938 MIR548AC-201ENST00000585049 88 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AL359999.1-201ENST00000604513 294 ntBASIC1.61□□□□□ -2.15
RFC3P40938 TUSC7.1-201ENST00000610969 165 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AL078595.3-201ENST00000623815 1166 ntBASIC1.61□□□□□ -2.15
RFC3P40938 SCARNA4-202ENST00000625402 129 ntBASIC1.61□□□□□ -2.15
RFC3P40938 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
RFC3P40938 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.61□□□□□ -2.15
RFC3P40938 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RFC3P40938 FARSBP1-201ENST00000435808 1778 ntBASIC1.6□□□□□ -2.15
RFC3P40938 RNU6-1210P-201ENST00000363775 107 ntBASIC1.6□□□□□ -2.15
RFC3P40938 SNORD116-20-201ENST00000384529 92 ntBASIC1.6□□□□□ -2.15
RFC3P40938 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RFC3P40938 CBX3P9-201ENST00000402326 552 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AL356432.1-201ENST00000405809 419 ntBASIC1.6□□□□□ -2.15
RFC3P40938 RNA5SP390-201ENST00000410191 113 ntBASIC1.6□□□□□ -2.15
RFC3P40938 RNU2-23P-201ENST00000410545 195 ntBASIC1.6□□□□□ -2.15
RFC3P40938 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.6□□□□□ -2.15
RFC3P40938 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.6□□□□□ -2.15
RFC3P40938 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 snoU13.14-201ENST00000459372 104 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AP000797.1-201ENST00000478870 387 ntBASIC1.6□□□□□ -2.15
RFC3P40938 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.6□□□□□ -2.15
RFC3P40938 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
RFC3P40938 SCARNA1-201ENST00000517138 166 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AP005639.2-201ENST00000527592 928 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.6□□□□□ -2.15
RFC3P40938 PCMTD1P2-201ENST00000565017 355 ntBASIC1.6□□□□□ -2.15
RFC3P40938 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
RFC3P40938 CLIC4P2-201ENST00000601934 717 ntBASIC1.6□□□□□ -2.15
RFC3P40938 AL158032.1-201ENST00000605401 106 ntBASIC1.6□□□□□ -2.15
RFC3P40938 RNU6-87P-201ENST00000607561 108 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms