Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.41□□□□□ -1.86
COL15A1P39059 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.41□□□□□ -1.86
COL15A1P39059 MTND4LP22-201ENST00000508209 276 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.41□□□□□ -1.86
COL15A1P39059 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.41□□□□□ -1.86
COL15A1P39059 Y_RNA.675-201ENST00000516389 149 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.41□□□□□ -1.86
COL15A1P39059 CYCSP27-201ENST00000527643 293 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 MTCO3P23-201ENST00000561363 289 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.41□□□□□ -1.86
COL15A1P39059 RPS3AP23-202ENST00000574601 686 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 AL117336.2-201ENST00000602435 335 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 AL359697.1-201ENST00000624879 587 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 AC112487.2-201ENST00000637950 304 ntBASIC3.41□□□□□ -1.86
COL15A1P39059 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
COL15A1P39059 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL15A1P39059 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL15A1P39059 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
COL15A1P39059 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL15A1P39059 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL15A1P39059 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL15A1P39059 RNU6-1303P-201ENST00000364841 107 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 RPS4XP3-201ENST00000398541 413 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.4□□□□□ -1.86
COL15A1P39059 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 AC092047.1-201ENST00000424997 240 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.4□□□□□ -1.86
COL15A1P39059 RNU7-66P-201ENST00000459469 62 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 AC022493.1-201ENST00000492984 337 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 RNU6-864P-201ENST00000516256 108 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 SNORA9.3-201ENST00000516383 129 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AC069113.1-201ENST00000517763 267 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AC105029.1-201ENST00000520250 669 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 RNU6-323P-201ENST00000521915 107 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.4□□□□□ -1.86
COL15A1P39059 C8orf59P2-201ENST00000603441 271 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AC021646.1-201ENST00000605469 484 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 uc_338.15-201ENST00000615470 191 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 AL031601.2-202ENST00000622650 282 ntBASIC3.4□□□□□ -1.86
COL15A1P39059 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.4□□□□□ -1.86
COL15A1P39059 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.4□□□□□ -1.86
COL15A1P39059 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.4□□□□□ -1.87
COL15A1P39059 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL15A1P39059 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 RNU6-254P-201ENST00000363377 107 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 RNU6-266P-201ENST00000364225 107 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC007560.1-201ENST00000426912 237 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AL135752.1-201ENST00000479477 471 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC139453.3-201ENST00000493276 369 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 ANXA2P1-201ENST00000505539 926 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.39□□□□□ -1.87
COL15A1P39059 RNU6-256P-201ENST00000516747 97 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC025755.1-201ENST00000521306 278 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AP000889.2-201ENST00000532684 490 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.39□□□□□ -1.87
COL15A1P39059 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.39□□□□□ -1.87
COL15A1P39059 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.39□□□□□ -1.87
COL15A1P39059 MIR3942-201ENST00000585264 109 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.39□□□□□ -1.87
COL15A1P39059 AC087045.1-201ENST00000605856 382 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 AC002044.1-201ENST00000606707 158 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
COL15A1P39059 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.39□□□□□ -1.87
COL15A1P39059 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.39□□□□□ -1.87
COL15A1P39059 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
COL15A1P39059 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COL15A1P39059 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
COL15A1P39059 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL15A1P39059 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
COL15A1P39059 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
COL15A1P39059 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL15A1P39059 MIR412-201ENST00000362142 91 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COL15A1P39059 AL590004.2-201ENST00000404787 371 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.38□□□□□ -1.87
COL15A1P39059 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.38□□□□□ -1.87
COL15A1P39059 TOMM20P4-201ENST00000427861 435 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 RPL12P25-201ENST00000455592 494 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 SRIP1-201ENST00000489235 288 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.38□□□□□ -1.87
COL15A1P39059 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.38□□□□□ -1.87
COL15A1P39059 MIR5692C1-201ENST00000585309 91 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 NUTF2P8-201ENST00000604593 363 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL15A1P39059 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.38□□□□□ -1.87
COL15A1P39059 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
COL15A1P39059 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms