Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN1P35523 Y_RNA.81-201ENST00000362997 102 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 RNU6-312P-201ENST00000364629 107 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 Y_RNA.568-201ENST00000384742 113 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 RNU6-735P-201ENST00000410612 107 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCN1P35523 HMGB1P37-201ENST00000439613 609 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 RPL23AP56-201ENST00000460778 453 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AC091179.3-201ENST00000474761 144 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN1P35523 AL592156.1-201ENST00000508758 304 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 SNORA31.16-201ENST00000516773 139 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 RN7SKP147-201ENST00000517154 244 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCN1P35523 AC024940.4-201ENST00000605507 246 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AC100827.5-201ENST00000615883 426 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 AC073073.2-201ENST00000609827 2578 ntBASIC5.24□□□□□ -1.57
CLCN1P35523 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN1P35523 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLCN1P35523 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN1P35523 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN1P35523 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN1P35523 Y_RNA.182-201ENST00000363880 111 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RNU4-17P-201ENST00000365598 141 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN1P35523 RNU6-1279P-201ENST00000383917 103 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RNA5SP390-201ENST00000410191 113 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RNA5SP129-201ENST00000410276 118 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RNU6-1199P-201ENST00000411249 104 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 ELOCP21-201ENST00000412558 336 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 AL732292.1-201ENST00000426692 226 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN1P35523 HMGN2P10-201ENST00000448085 265 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RN7SL329P-201ENST00000467740 299 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RN7SL860P-201ENST00000473738 223 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 RPS27AP9-201ENST00000477681 438 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN1P35523 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN1P35523 SUMO2P18-201ENST00000518873 252 ntBASIC5.23□□□□□ -1.57
CLCN1P35523 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN1P35523 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCN1P35523 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCN1P35523 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLCN1P35523 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN1P35523 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCN1P35523 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CLCN1P35523 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLCN1P35523 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN1P35523 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CLCN1P35523 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 RNU1-15P-201ENST00000353977 144 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 Y_RNA.23-201ENST00000362496 106 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RNU6-727P-201ENST00000363592 107 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 Y_RNA.215-201ENST00000364204 112 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 Y_RNA.412-201ENST00000384001 104 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RNU6-245P-201ENST00000384020 107 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RNU2-54P-201ENST00000410299 190 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RN7SKP53-201ENST00000411337 315 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC093162.1-201ENST00000419682 124 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 SEPT7P4-201ENST00000437076 306 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC073850.1-201ENST00000449243 255 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN1P35523 AC007215.1-201ENST00000464893 276 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC090525.1-201ENST00000479116 478 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN1P35523 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.22□□□□□ -1.57
CLCN1P35523 MIR2114-201ENST00000516645 80 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 RNA5SP468-201ENST00000516782 93 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC090897.2-201ENST00000581715 130 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN1P35523 AL138721.1-201ENST00000616756 179 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 AC019206.1-201ENST00000621938 425 ntBASIC5.22□□□□□ -1.57
CLCN1P35523 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN1P35523 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLCN1P35523 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN1P35523 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN1P35523 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLCN1P35523 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.21□□□□□ -1.57
CLCN1P35523 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLCN1P35523 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CLCN1P35523 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN1P35523 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN1P35523 RNA5SP507-201ENST00000363603 121 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 AL357075.1-201ENST00000404107 726 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 MIR320B2-201ENST00000408479 138 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 RNA5SP475-201ENST00000410568 110 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 CEACAMP7-201ENST00000444105 496 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 UQCRHP4-201ENST00000471686 272 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 AC140172.1-201ENST00000502928 141 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN1P35523 RNU6-928P-201ENST00000516876 104 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 RNU6-709P-201ENST00000517257 104 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms