Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC109446.2-201ENST00000567872 497 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
RORAP35398 AC005771.1-201ENST00000585581 349 ntBASIC1.88□□□□□ -2.11
RORAP35398 AL109918.3-201ENST00000603072 338 ntBASIC1.88□□□□□ -2.11
RORAP35398 AC087045.1-201ENST00000605856 382 ntBASIC1.88□□□□□ -2.11
RORAP35398 AL121992.2-201ENST00000606262 256 ntBASIC1.88□□□□□ -2.11
RORAP35398 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.88□□□□□ -2.11
RORAP35398 AF246928.1-201ENST00000623768 87 ntBASIC1.88□□□□□ -2.11
RORAP35398 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.88□□□□□ -2.11
RORAP35398 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
RORAP35398 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.87□□□□□ -2.11
RORAP35398 RNU6-384P-201ENST00000364900 104 ntBASIC1.87□□□□□ -2.11
RORAP35398 RNU6-169P-201ENST00000365336 107 ntBASIC1.87□□□□□ -2.11
RORAP35398 RNU6-61P-201ENST00000365528 109 ntBASIC1.87□□□□□ -2.11
RORAP35398 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
RORAP35398 Y_RNA.598-201ENST00000410480 95 ntBASIC1.87□□□□□ -2.11
RORAP35398 AL030996.1-201ENST00000411430 235 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.87□□□□□ -2.11
RORAP35398 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.87□□□□□ -2.11
RORAP35398 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.87□□□□□ -2.11
RORAP35398 AL445567.1-201ENST00000439121 144 ntBASIC1.87□□□□□ -2.11
RORAP35398 USP9YP8-201ENST00000441913 500 ntBASIC1.87□□□□□ -2.11
RORAP35398 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
RORAP35398 AL133217.1-201ENST00000450980 425 ntBASIC1.87□□□□□ -2.11
RORAP35398 MTCYBP1-201ENST00000454315 1119 ntBASIC1.87□□□□□ -2.11
RORAP35398 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC140059.1-201ENST00000489238 361 ntBASIC1.87□□□□□ -2.11
RORAP35398 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.87□□□□□ -2.11
RORAP35398 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
RORAP35398 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.87□□□□□ -2.11
RORAP35398 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.87□□□□□ -2.11
RORAP35398 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
RORAP35398 MTCYBP33-201ENST00000575007 1130 ntBASIC1.87□□□□□ -2.11
RORAP35398 MIR3915-201ENST00000578518 97 ntBASIC1.87□□□□□ -2.11
RORAP35398 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC008521.1-201ENST00000587471 187 ntBASIC1.87□□□□□ -2.11
RORAP35398 AL031274.2-201ENST00000599419 203 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC243960.4-201ENST00000600532 288 ntBASIC1.87□□□□□ -2.11
RORAP35398 AL713866.2-201ENST00000603579 219 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
RORAP35398 AL158032.1-201ENST00000605401 106 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC087683.2-201ENST00000611384 326 ntBASIC1.87□□□□□ -2.11
RORAP35398 MIR6845-201ENST00000613182 61 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC122133.1-201ENST00000613964 233 ntBASIC1.87□□□□□ -2.11
RORAP35398 AC092656.1-203ENST00000624134 423 ntBASIC1.87□□□□□ -2.11
RORAP35398 MIR412-201ENST00000362142 91 ntBASIC1.86□□□□□ -2.11
RORAP35398 RNU6-858P-201ENST00000362436 107 ntBASIC1.86□□□□□ -2.11
RORAP35398 RNU4-21P-201ENST00000362802 126 ntBASIC1.86□□□□□ -2.11
RORAP35398 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
RORAP35398 RNU2-39P-201ENST00000410604 198 ntBASIC1.86□□□□□ -2.11
RORAP35398 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RORAP35398 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 CYCSP46-201ENST00000423569 204 ntBASIC1.86□□□□□ -2.11
RORAP35398 MTND4P20-201ENST00000424125 869 ntBASIC1.86□□□□□ -2.11
RORAP35398 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.86□□□□□ -2.11
RORAP35398 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 MTATP6P16-201ENST00000434543 526 ntBASIC1.86□□□□□ -2.11
RORAP35398 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.86□□□□□ -2.11
RORAP35398 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 AL022238.1-201ENST00000442557 355 ntBASIC1.86□□□□□ -2.11
RORAP35398 AL360271.2-201ENST00000447710 161 ntBASIC1.86□□□□□ -2.11
RORAP35398 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 snoU109.2-201ENST00000459316 135 ntBASIC1.86□□□□□ -2.11
RORAP35398 MED28P2-201ENST00000475771 317 ntBASIC1.86□□□□□ -2.11
RORAP35398 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.86□□□□□ -2.11
RORAP35398 Y_RNA.717-201ENST00000517106 92 ntBASIC1.86□□□□□ -2.11
RORAP35398 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 FAM92A1P1-201ENST00000528023 890 ntBASIC1.86□□□□□ -2.11
RORAP35398 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 LRRC34P1-201ENST00000542742 915 ntBASIC1.86□□□□□ -2.11
RORAP35398 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 AC136619.2-201ENST00000563361 631 ntBASIC1.86□□□□□ -2.11
RORAP35398 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RORAP35398 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.86□□□□□ -2.11
RORAP35398 AL157786.1-207ENST00000627771 695 ntBASIC1.86□□□□□ -2.11
RORAP35398 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.86□□□□□ -2.11
RORAP35398 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RORAP35398 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RORAP35398 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RORAP35398 RNA5SP160-201ENST00000364866 120 ntBASIC1.85□□□□□ -2.11
RORAP35398 RNU6-72P-201ENST00000384285 79 ntBASIC1.85□□□□□ -2.11
RORAP35398 MIR95-201ENST00000385072 81 ntBASIC1.85□□□□□ -2.11
RORAP35398 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC127391.1-201ENST00000411737 98 ntBASIC1.85□□□□□ -2.11
RORAP35398 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 AL365203.2-201ENST00000423444 196 ntBASIC1.85□□□□□ -2.11
RORAP35398 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 MTND1P30-201ENST00000441241 901 ntBASIC1.85□□□□□ -2.11
RORAP35398 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 NDUFB1P2-201ENST00000449477 176 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms