Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.84□□□□□ -1.79
VAMP1P23763 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
VAMP1P23763 AL606490.9-201ENST00000603331 271 ntBASIC3.84□□□□□ -1.79
VAMP1P23763 MIR6780B-201ENST00000610307 79 ntBASIC3.84□□□□□ -1.79
VAMP1P23763 AC099778.2-201ENST00000610904 211 ntBASIC3.84□□□□□ -1.79
VAMP1P23763 AC005562.2-201ENST00000618264 111 ntBASIC3.84□□□□□ -1.79
VAMP1P23763 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VAMP1P23763 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.84□□□□□ -1.8
VAMP1P23763 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VAMP1P23763 AC080128.1-201ENST00000474389 1917 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 BX322639.1-202ENST00000423987 2213 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.83□□□□□ -1.8
VAMP1P23763 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VAMP1P23763 RNU1-15P-201ENST00000353977 144 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 Y_RNA.47-201ENST00000362697 108 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 RNU6-398P-201ENST00000384143 109 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VAMP1P23763 MICF-203ENST00000432679 129 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 HLA-N-201ENST00000437516 135 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 CYCSP35-201ENST00000451978 304 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 CYP2C59P-201ENST00000457790 269 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AC007215.1-201ENST00000464893 276 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.83□□□□□ -1.8
VAMP1P23763 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP1P23763 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.83□□□□□ -1.8
VAMP1P23763 AC015795.1-201ENST00000513669 327 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 RNU6-1143P-201ENST00000516125 104 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 MIR5006-201ENST00000583027 110 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.83□□□□□ -1.8
VAMP1P23763 AC011487.3-201ENST00000593607 453 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.83□□□□□ -1.8
VAMP1P23763 HMGB1P50-201ENST00000605814 607 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 MIR6861-201ENST00000618657 64 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 MIR6837-201ENST00000620884 64 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 AL355480.1-201ENST00000629041 99 ntBASIC3.83□□□□□ -1.8
VAMP1P23763 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VAMP1P23763 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
VAMP1P23763 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP1P23763 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP1P23763 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP1P23763 RLIMP1-201ENST00000339626 1680 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP1P23763 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP1P23763 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP1P23763 RNA5SP361-201ENST00000362686 118 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNA5SP151-201ENST00000365632 117 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 AC068538.1-201ENST00000376856 336 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNU1-63P-201ENST00000383902 164 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 SNORA18.3-201ENST00000384122 132 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNU6-281P-201ENST00000384212 103 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 FO393413.1-201ENST00000402892 195 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNA5SP201-201ENST00000410316 124 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 Y_RNA.597-201ENST00000410463 100 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RNU6-1001P-201ENST00000411265 100 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
VAMP1P23763 AC079168.2-201ENST00000453977 416 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 ISCUP1-201ENST00000454451 448 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 AC010655.3-201ENST00000478818 450 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.82□□□□□ -1.8
VAMP1P23763 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.82□□□□□ -1.8
VAMP1P23763 Y_RNA.683-201ENST00000516508 93 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RN7SKP49-201ENST00000516675 260 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 MIR5699-201ENST00000578903 90 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 MIR4659A-201ENST00000580269 81 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP1P23763 7SK.10-201ENST00000621414 298 ntBASIC3.82□□□□□ -1.8
VAMP1P23763 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP1P23763 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP1P23763 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
VAMP1P23763 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP1P23763 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP1P23763 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP1P23763 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP1P23763 SNURFL-201ENST00000309296 343 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 RN7SKP160-201ENST00000363804 340 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
VAMP1P23763 RNU6-793P-201ENST00000384233 104 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 Y_RNA.574-201ENST00000384766 95 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 RN7SKP220-201ENST00000410611 288 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 RNU2-63P-201ENST00000410792 194 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 AC114755.2-201ENST00000413520 361 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 RPEP5-201ENST00000441137 268 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 AC073910.1-201ENST00000445047 438 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.81□□□□□ -1.8
VAMP1P23763 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.81□□□□□ -1.8
VAMP1P23763 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.81□□□□□ -1.8
VAMP1P23763 AC022726.1-201ENST00000587475 207 ntBASIC3.81□□□□□ -1.8
VAMP1P23763 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP1P23763 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP1P23763 RNA5SP440-201ENST00000612665 119 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms