Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL450472.1-202ENST00000637286 180 ntBASIC4.77□□□□□ -1.65
RFX1P22670 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.77□□□□□ -1.65
RFX1P22670 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFX1P22670 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFX1P22670 LINC01355-201ENST00000566551 5444 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX1P22670 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RFX1P22670 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX1P22670 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RFX1P22670 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RFX1P22670 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 RNU6-879P-201ENST00000364328 108 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RNU6-200P-201ENST00000364743 107 ntBASIC4.76□□□□□ -1.65
RFX1P22670 Y_RNA.319-201ENST00000365138 92 ntBASIC4.76□□□□□ -1.65
RFX1P22670 Y_RNA.352-201ENST00000365439 102 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RNU6-338P-201ENST00000383888 105 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RNU6-541P-201ENST00000384709 110 ntBASIC4.76□□□□□ -1.65
RFX1P22670 MIR3065-201ENST00000390137 79 ntBASIC4.76□□□□□ -1.65
RFX1P22670 UBA52P6-201ENST00000399822 382 ntBASIC4.76□□□□□ -1.65
RFX1P22670 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 RN7SKP202-201ENST00000410439 330 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RPS26P42-201ENST00000413485 326 ntBASIC4.76□□□□□ -1.65
RFX1P22670 TMSB10P2-201ENST00000416049 131 ntBASIC4.76□□□□□ -1.65
RFX1P22670 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX1P22670 AL161651.1-201ENST00000440882 223 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RNU5B-3P-201ENST00000516601 115 ntBASIC4.76□□□□□ -1.65
RFX1P22670 CYCSP29-201ENST00000533731 318 ntBASIC4.76□□□□□ -1.65
RFX1P22670 RN7SL176P-201ENST00000580352 264 ntBASIC4.76□□□□□ -1.65
RFX1P22670 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFX1P22670 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX1P22670 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 AC004944.1-201ENST00000517807 3059 ntBASIC4.75□□□□□ -1.65
RFX1P22670 AC002543.1-201ENST00000299783 1954 ntBASIC4.75□□□□□ -1.65
RFX1P22670 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX1P22670 SPRR2C-201ENST00000290702 219 ntBASIC4.75□□□□□ -1.65
RFX1P22670 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFX1P22670 Y_RNA.462-201ENST00000384268 102 ntBASIC4.75□□□□□ -1.65
RFX1P22670 RNU6-937P-201ENST00000384325 106 ntBASIC4.75□□□□□ -1.65
RFX1P22670 RNU4-70P-201ENST00000384579 139 ntBASIC4.75□□□□□ -1.65
RFX1P22670 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFX1P22670 RNU6-159P-201ENST00000391080 106 ntBASIC4.75□□□□□ -1.65
RFX1P22670 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.75□□□□□ -1.65
RFX1P22670 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 RPL39P29-201ENST00000447779 157 ntBASIC4.75□□□□□ -1.65
RFX1P22670 RNU7-23P-201ENST00000459465 62 ntBASIC4.75□□□□□ -1.65
RFX1P22670 SNRPGP7-201ENST00000469016 106 ntBASIC4.75□□□□□ -1.65
RFX1P22670 PPBPP1-201ENST00000510807 373 ntBASIC4.75□□□□□ -1.65
RFX1P22670 FTH1P9-201ENST00000513251 355 ntBASIC4.75□□□□□ -1.65
RFX1P22670 RN7SKP49-201ENST00000516675 260 ntBASIC4.75□□□□□ -1.65
RFX1P22670 AC115990.1-201ENST00000526957 301 ntBASIC4.75□□□□□ -1.65
RFX1P22670 AC079587.1-201ENST00000603846 277 ntBASIC4.75□□□□□ -1.65
RFX1P22670 RNU6-91P-201ENST00000607774 107 ntBASIC4.75□□□□□ -1.65
RFX1P22670 AL445567.2-201ENST00000618935 498 ntBASIC4.75□□□□□ -1.65
RFX1P22670 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX1P22670 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RFX1P22670 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX1P22670 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX1P22670 UBE3AP2-201ENST00000429033 2259 ntBASIC4.74□□□□□ -1.65
RFX1P22670 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFX1P22670 RNU1-15P-201ENST00000353977 144 ntBASIC4.74□□□□□ -1.65
RFX1P22670 Y_RNA.16-201ENST00000362421 102 ntBASIC4.74□□□□□ -1.65
RFX1P22670 SNORD113-8-201ENST00000363497 74 ntBASIC4.74□□□□□ -1.65
RFX1P22670 RNU6-281P-201ENST00000384212 103 ntBASIC4.74□□□□□ -1.65
RFX1P22670 Y_RNA.541-201ENST00000384640 113 ntBASIC4.74□□□□□ -1.65
RFX1P22670 MIR10B-201ENST00000385011 110 ntBASIC4.74□□□□□ -1.65
RFX1P22670 SNORD58.1-201ENST00000391313 66 ntBASIC4.74□□□□□ -1.65
RFX1P22670 AL603910.2-201ENST00000407268 136 ntBASIC4.74□□□□□ -1.65
RFX1P22670 AC023141.4-201ENST00000412031 328 ntBASIC4.74□□□□□ -1.65
RFX1P22670 CYCSP48-201ENST00000417124 323 ntBASIC4.74□□□□□ -1.65
RFX1P22670 ABCF2P2-201ENST00000450549 296 ntBASIC4.74□□□□□ -1.65
RFX1P22670 CEACAMP4-201ENST00000457676 421 ntBASIC4.74□□□□□ -1.65
RFX1P22670 AP002884.2-201ENST00000471647 395 ntBASIC4.74□□□□□ -1.65
RFX1P22670 AC006499.6-201ENST00000511169 607 ntBASIC4.74□□□□□ -1.65
RFX1P22670 RNU6-138P-201ENST00000515952 107 ntBASIC4.74□□□□□ -1.65
RFX1P22670 RNU6-58P-201ENST00000517143 103 ntBASIC4.74□□□□□ -1.65
RFX1P22670 RNU1-45P-201ENST00000517191 141 ntBASIC4.74□□□□□ -1.65
RFX1P22670 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.74□□□□□ -1.65
RFX1P22670 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.74□□□□□ -1.65
RFX1P22670 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RFX1P22670 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RFX1P22670 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.74□□□□□ -1.65
RFX1P22670 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX1P22670 RBBP8P1-201ENST00000449447 1844 ntBASIC4.74□□□□□ -1.65
RFX1P22670 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.73□□□□□ -1.65
RFX1P22670 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFX1P22670 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFX1P22670 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFX1P22670 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
RFX1P22670 RNU6-926P-201ENST00000384075 107 ntBASIC4.73□□□□□ -1.65
RFX1P22670 RNA5SP36-201ENST00000410197 133 ntBASIC4.73□□□□□ -1.65
RFX1P22670 Y_RNA.602-201ENST00000410535 92 ntBASIC4.73□□□□□ -1.65
RFX1P22670 MIR1911-201ENST00000410783 80 ntBASIC4.73□□□□□ -1.65
RFX1P22670 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms