Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 Y_RNA.582-201ENST00000391023 95 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 CALM2P3-201ENST00000400429 449 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 POLHP1-201ENST00000411806 470 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.59□□□□□ -2.15
COL5A1P20908 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL5A1P20908 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.59□□□□□ -2.15
COL5A1P20908 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.59□□□□□ -2.15
COL5A1P20908 AC016691.1-201ENST00000441321 413 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.59□□□□□ -2.15
COL5A1P20908 RPS3AP17-201ENST00000472594 777 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.59□□□□□ -2.15
COL5A1P20908 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
COL5A1P20908 AC011352.1-201ENST00000512300 793 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 AL117351.2-201ENST00000513571 157 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.59□□□□□ -2.15
COL5A1P20908 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.59□□□□□ -2.15
COL5A1P20908 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.59□□□□□ -2.15
COL5A1P20908 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.59□□□□□ -2.15
COL5A1P20908 HMGB1P33-201ENST00000563485 527 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.59□□□□□ -2.15
COL5A1P20908 AL390240.1-201ENST00000612950 384 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.59□□□□□ -2.15
COL5A1P20908 AC095038.3-201ENST00000634439 195 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 DDX10P1-201ENST00000448545 1933 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
COL5A1P20908 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
COL5A1P20908 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A1P20908 RNU6-989P-201ENST00000362756 107 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 RNU5E-8P-201ENST00000363502 116 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 RNY1P12-201ENST00000364251 105 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 RNU5E-6P-201ENST00000365574 115 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 RNU6-878P-201ENST00000384578 110 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 Y_RNA.554-201ENST00000384672 102 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A1P20908 C1DP2-201ENST00000418167 426 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A1P20908 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A1P20908 MTCO2P29-201ENST00000465212 189 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 MTCO3P38-201ENST00000468910 766 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC092991.1-201ENST00000477176 376 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC021382.1-201ENST00000483523 359 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.59□□□□□ -2.16
COL5A1P20908 AC010493.1-201ENST00000513479 292 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
COL5A1P20908 AC022616.6-201ENST00000520479 119 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AL133153.1-201ENST00000557756 303 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.59□□□□□ -2.16
COL5A1P20908 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC008752.3-201ENST00000588113 712 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AP001429.1-201ENST00000602568 530 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 XIAPP1-201ENST00000603162 600 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC012507.3-201ENST00000603556 477 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC093788.1-201ENST00000609356 927 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AL161734.1-201ENST00000609720 557 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AC109347.2-201ENST00000610220 349 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 AL359880.1-201ENST00000621879 266 ntBASIC1.59□□□□□ -2.16
COL5A1P20908 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A1P20908 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.59□□□□□ -2.16
COL5A1P20908 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.58□□□□□ -2.16
COL5A1P20908 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A1P20908 RNU5A-8P-201ENST00000364102 114 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 RNA5SP139-201ENST00000364340 117 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 RNU6-335P-201ENST00000364563 113 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL5A1P20908 Y_RNA.453-201ENST00000384223 109 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 RNU6-456P-201ENST00000384493 107 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 RNU6-837P-201ENST00000391056 108 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.58□□□□□ -2.16
COL5A1P20908 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.58□□□□□ -2.16
COL5A1P20908 FGF7P6-202ENST00000451282 293 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A1P20908 RPL31P58-201ENST00000469001 379 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A1P20908 HMGB1P29-201ENST00000505659 499 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.58□□□□□ -2.16
COL5A1P20908 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A1P20908 RNU2-10P-201ENST00000516375 211 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 RN7SKP258-201ENST00000517151 304 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.58□□□□□ -2.16
COL5A1P20908 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A1P20908 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.58□□□□□ -2.16
COL5A1P20908 MIR4293-201ENST00000584305 78 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.58□□□□□ -2.16
COL5A1P20908 AC004067.1-201ENST00000608733 700 ntBASIC1.58□□□□□ -2.16
COL5A1P20908 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.58□□□□□ -2.16
COL5A1P20908 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.58□□□□□ -2.16
COL5A1P20908 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL5A1P20908 AC073343.1-201ENST00000328239 651 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU5E-1-201ENST00000362477 120 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-1097P-201ENST00000363586 107 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-288P-201ENST00000363690 104 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-1284P-201ENST00000363701 100 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU4-66P-201ENST00000365199 138 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-1029P-201ENST00000384109 107 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms