Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.485-201ENST00000384395 102 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 RNA5SP354-201ENST00000391247 136 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 MIR1251-201ENST00000408552 70 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AL035423.1-201ENST00000420331 213 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AL139247.1-201ENST00000422768 325 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 HMGN2P31-201ENST00000432430 273 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 RPL23AP83-201ENST00000434984 473 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.46□□□□□ -1.7
ERCC3P19447 OR2AQ1P-201ENST00000451972 200 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.46□□□□□ -1.7
ERCC3P19447 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.46□□□□□ -1.7
ERCC3P19447 SNORA31.23-201ENST00000517219 133 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.46□□□□□ -1.7
ERCC3P19447 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.46□□□□□ -1.7
ERCC3P19447 AC025281.1-201ENST00000567026 265 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC3P19447 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC3P19447 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.46□□□□□ -1.7
ERCC3P19447 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 AC010889.1-201ENST00000566193 2666 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC3P19447 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ERCC3P19447 ZNF72P-201ENST00000425869 1908 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC3P19447 RNU6-595P-201ENST00000363944 107 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 RNU6-784P-201ENST00000384330 106 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 Y_RNA.504-201ENST00000384481 104 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AC083863.1-201ENST00000438811 231 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC3P19447 AL353705.4-201ENST00000449661 238 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 RN7SL330P-201ENST00000469709 307 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC3P19447 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC3P19447 IGKV2-38-201ENST00000517443 247 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AL590705.4-201ENST00000532209 134 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 MRPS36P4-201ENST00000534436 298 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 MIR5696-201ENST00000578474 85 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC3P19447 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC3P19447 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AC007179.3-201ENST00000604976 235 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AL162730.1-201ENST00000605734 292 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC3P19447 UBE3AP2-201ENST00000429033 2259 ntBASIC4.45□□□□□ -1.7
ERCC3P19447 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
ERCC3P19447 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC3P19447 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC3P19447 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC3P19447 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 Y_RNA.145-201ENST00000363527 102 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 U3.13-201ENST00000364804 214 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ERCC3P19447 Y_RNA.527-201ENST00000384573 102 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 SNORA3C-201ENST00000408792 125 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 RNU2-23P-201ENST00000410545 195 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 RNA5SP494-201ENST00000410653 129 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 AL031659.1-201ENST00000447075 539 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 RNU7-87P-201ENST00000459343 62 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 AC015911.1-201ENST00000495111 156 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 GZMAP1-201ENST00000503054 631 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 AC110768.1-201ENST00000509222 400 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 RNU7-4P-201ENST00000516961 62 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC3P19447 HSPE1P4-201ENST00000550617 308 ntBASIC4.44□□□□□ -1.7
ERCC3P19447 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC3P19447 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
ERCC3P19447 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC3P19447 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
ERCC3P19447 AC005592.1-201ENST00000566527 1640 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC3P19447 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ERCC3P19447 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.43□□□□□ -1.7
ERCC3P19447 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC3P19447 RNU1-105P-201ENST00000363470 161 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC3P19447 RNU6-843P-201ENST00000384454 104 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.43□□□□□ -1.7
ERCC3P19447 AC079354.2-201ENST00000453523 154 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.43□□□□□ -1.7
ERCC3P19447 AC104564.1-201ENST00000493028 407 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 AC104619.4-201ENST00000510773 249 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 AC091874.1-201ENST00000511402 339 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 AP000889.1-201ENST00000530968 660 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC3P19447 AC091152.3-201ENST00000604227 325 ntBASIC4.43□□□□□ -1.7
ERCC3P19447 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC3P19447 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC3P19447 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC3P19447 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC3P19447 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
ERCC3P19447 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.42□□□□□ -1.7
ERCC3P19447 Y_RNA.158-201ENST00000363651 101 ntBASIC4.42□□□□□ -1.7
ERCC3P19447 RNU1-115P-201ENST00000365329 160 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms