Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 HMGB1P37-201ENST00000439613 609 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 AL353705.4-201ENST00000449661 238 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.48□□□□□ -1.69
PTPRAP18433 COX6CP14-201ENST00000469580 174 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 RN7SL585P-201ENST00000470538 280 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 AC022795.1-201ENST00000473808 480 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 MRPL42P6-201ENST00000486397 371 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 RPL7P47-201ENST00000497299 556 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.48□□□□□ -1.69
PTPRAP18433 RNU2-31P-201ENST00000516954 155 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 RPL23AP88-201ENST00000605759 454 ntBASIC4.48□□□□□ -1.69
PTPRAP18433 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPRAP18433 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
PTPRAP18433 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPRAP18433 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PTPRAP18433 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTPRAP18433 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPRAP18433 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPRAP18433 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPRAP18433 RNA5SP72-201ENST00000364442 117 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 RNU6-326P-201ENST00000365480 107 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 RNU6-741P-201ENST00000383889 107 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 MIR491-201ENST00000384877 84 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 MIR32-201ENST00000384965 70 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 EIF1P2-201ENST00000428233 350 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 AC011742.1-201ENST00000431448 434 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPRAP18433 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.47□□□□□ -1.69
PTPRAP18433 RPS15AP7-201ENST00000439294 405 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 RN7SKP18-201ENST00000516005 275 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 RNA5SP164-201ENST00000516533 110 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 MZT1P2-201ENST00000604387 248 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 AC072026.1-201ENST00000605023 201 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 SNORD113-5-201ENST00000607261 78 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 MIR7975-201ENST00000619350 68 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 AC099506.2-201ENST00000623074 221 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 SCARNA4-202ENST00000625402 129 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.47□□□□□ -1.69
PTPRAP18433 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPRAP18433 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
PTPRAP18433 AC073346.2-201ENST00000624724 2058 ntBASIC4.47□□□□□ -1.69
PTPRAP18433 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPRAP18433 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPRAP18433 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPRAP18433 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.46□□□□□ -1.69
PTPRAP18433 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPRAP18433 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPRAP18433 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPRAP18433 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPRAP18433 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPRAP18433 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPRAP18433 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPRAP18433 RPS4XP3-201ENST00000398541 413 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPRAP18433 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPRAP18433 snoU13.24-201ENST00000458998 104 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPRAP18433 AP000870.1-201ENST00000472927 406 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 RPS29P26-201ENST00000477483 171 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 RPL30P1-201ENST00000488676 339 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 HMGB1P22-201ENST00000505315 124 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 RNU6-346P-201ENST00000516288 111 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 SNORA74D-201ENST00000516404 141 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 RNA5SP291-201ENST00000517222 105 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 IGKV2-38-201ENST00000517443 247 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPRAP18433 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPRAP18433 AC037487.3-201ENST00000606668 112 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 RMST_6.1-201ENST00000611980 203 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AC027309.3-201ENST00000623419 351 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AL773545.4-201ENST00000637262 310 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AC241585.2-209ENST00000638217 143 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AL513478.4-201ENST00000641636 310 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 AL359693.1-201ENST00000614959 2407 ntBASIC4.46□□□□□ -1.7
PTPRAP18433 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPRAP18433 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPRAP18433 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPRAP18433 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTPRAP18433 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PTPRAP18433 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPRAP18433 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPRAP18433 AC027290.2-201ENST00000623210 18662 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 RNA5SP361-201ENST00000362686 118 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 RNU6-335P-201ENST00000364563 113 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 RNVU1-14-201ENST00000384770 164 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 UBA52P6-201ENST00000399822 382 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 HDGFP1-201ENST00000405943 252 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPRAP18433 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPRAP18433 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPRAP18433 SNORA70.24-201ENST00000517233 118 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPRAP18433 MIR548AI-201ENST00000579940 88 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPRAP18433 AC011921.3-201ENST00000605540 361 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 AP002826.1-201ENST00000608835 315 ntBASIC4.45□□□□□ -1.7
PTPRAP18433 AL590240.4-201ENST00000616908 390 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms